Cucumis sativus (cucumber): 101220511
Help
Entry
101220511 CDS
T02486
Name
(RefSeq) ribosome biogenesis protein BOP1 homolog
KO
K14824
ribosome biogenesis protein ERB1
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101220511
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101220511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_DCAF12
WD40_like
Spindle_Spc25
MIOS_WD40
Beta-prop_Nup120_160
TFIIE_alpha
Elongin_A
Frtz
Motif
Other DBs
NCBI-GeneID:
101220511
NCBI-ProteinID:
XP_011656053
LinkDB
All DBs
Position
5:31260007..31267601
Genome browser
AA seq
723 aa
AA seq
DB search
MKLKLDNKSSRKACKLQTKHGKKKSHVNESKSQPEKQNDVELDLEQEAPTLDEATVQQHL
DSSPPFDCSEDNVNAGDDHHNLENDKDQENCDDNPLPDQGEEESDSSEDEVAPRNTVGDV
PLEWYRDEKHIGYDISGKKILKKEREDRLQSFLASADDSKSWRKVYDEYNDEIIELSKEE
VRQLRRLLKGKAPHADFDPHAPYVDWFKWDDAKHPLSNAPEPKRRFIRSKWEAKKVVRLV
RAIRNGHIKFDKPKEEQQFHDLWGDDSSTTEKTSHLSYIPAPKPKLPGHDESYNPSLEYI
PTQEEINSYQLMYEEDRPKFIPRRFTSMRSVPAYDNALKDAFERCLDLYLCPRVRKKRIN
IDPESLKPKLPNRKDLRPYPTTCYLEYRGHKDAVMSISTEANGQWIASGSLDGTVRIWEV
ETGRCLKVLELGEPVKYVAWNPRPDLPILAAAAGADVLLLNTGLGDGEVQAKIKEVLHVD
KLPVTENSDKTPAATWLQDDKTGGIRLRHFKSVSAVEWHRKGDYLSTVLPAGESKAVLIH
QLSKKLTQKIPFKLHGLPVSSVFHPTQSILFVSTKKEVRVYNLLKQKLLKKLKTGLREVS
SIAVHPAGDNVIVGSREGKLCWFDMDLSSEPYKILRCHPKDITNVAFHRSRPLFASCSDD
GTAYVFHGMVYSDLTQNPLITPLEILRGHKTVNGRGVMDCKFHPMQPWLFTAGADSVIKL
YCH
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaagcttgacaacaagagctcgcgaaaggcatgcaagctacagacgaagcat
ggtaaaaagaaaagccacgtcaatgaaagcaaaagtcaacctgaaaagcagaacgatgtt
gaactagatttggaacaagaagctccaactctagatgaggctacagtacaacagcattta
gattcttctccaccctttgattgtagcgaggataatgtcaatgcaggtgacgatcatcat
aatttagagaatgataaggaccaagaaaactgtgatgacaaccccttacctgatcaagga
gaggaggaaagtgattcatctgaggatgaggtagctcctaggaatacagttggagatgtt
cccttggaatggtatagagatgagaaacatatcggatatgacatatctggaaagaaaata
ttgaagaaagaaagagaagacagattacaatcatttttagcaagtgccgatgactcaaaa
agttggcgcaaggtatatgatgaatacaatgatgagataatagagttatcgaaggaagaa
gtcaggcaactgcggagactgctcaaaggaaaggcaccacatgcagactttgatccccat
gcgccttatgttgattggtttaagtgggatgatgctaagcacccactgtcaaatgcacct
gaaccaaagaggcgttttatccggtcaaaatgggaggccaagaaggttgttcgattagtt
cgggcaattcgaaatggacacattaagtttgacaagcccaaagaggagcaacagttccac
gatttgtggggcgatgattcgagcaccacagagaagacctcacatctgtcttacattcct
gcaccaaaaccaaagttgccaggtcatgatgaatcatataatccttcactggaatatatc
cctactcaagaagaaataaactcatatcagttaatgtatgaagaagatcgaccaaagttt
attcctaggaggtttacatccatgagaagtgtacctgcctatgataatgctcttaaggat
gcatttgagcgttgtttggatctatatttgtgccctcgtgttcggaagaagcgtattaat
attgatcctgaatctttgaaacctaagctgccaaaccggaaagatcttagaccttatccg
actacatgctatcttgaatatagaggtcacaaggatgcggtaatgtccatttcaactgaa
gccaatggccaatggattgcttcaggttcattggatggaactgttcggatatgggaagtt
gaaacaggcagatgtcttaaagtgttggagcttggggaacctgtgaagtatgtagcttgg
aatcctaggcctgatcttcccatattggctgctgctgcaggtgctgatgtattactttta
aacactggtcttggggatggggaggtgcaagcaaaaattaaggaagttctccatgttgac
aagcttcctgttacagaaaattctgataaaacaccagctgcgacctggcttcaagatgac
aagactggggggattagattgaggcattttaagagtgtatctgcagttgaatggcatcgt
aaaggagactacctttcaacagttttaccagctggtgaatcaaaagcagttcttattcat
cagctctctaaaaagttaacacaaaaaattccattcaagttgcatgggcttcctgtttca
tcagtttttcaccccactcaatctattctctttgtatcaacgaagaaggaggttcgtgtt
tataatttattgaagcaaaagctcctgaaaaaactgaaaactggactccgtgaagtttct
tctattgctgtgcatccagctggtgacaatgttatcgtggggagcagagaaggaaagtta
tgttggtttgacatggatctttcatcagagccttacaaaattctccgctgccatccaaaa
gatataacaaatgttgccttccatcgatcacgtccattatttgcatcttgctctgatgat
ggcaccgcatatgttttccatgggatggtttactctgatcttacacagaatcctcttatt
acaccgttggaaatactaagaggacacaaaaccgtcaatggaagaggagtaatggattgc
aagtttcacccaatgcagccatggttatttactgctggtgcagattcagtgatcaaattg
tactgccattga
DBGET
integrated database retrieval system
