Cucumis sativus (cucumber): 101220517
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Entry
101220517 CDS
T02486
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC101220517
KO
K03231
elongation factor 1-alpha
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101220517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101220517
03016 Transfer RNA biogenesis [BR:
csv03016
]
101220517
03012 Translation factors [BR:
csv03012
]
101220517
04131 Membrane trafficking [BR:
csv04131
]
101220517
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101220517
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101220517
Transfer RNA biogenesis [BR:
csv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
101220517
Translation factors [BR:
csv03012
]
Eukaryotic type
Elongation factors
101220517
Membrane trafficking [BR:
csv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
101220517
Exosome [BR:
csv04147
]
Exosomal proteins
Proteins found in most exosomes
101220517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
FcpA
G-alpha
Motif
Other DBs
NCBI-GeneID:
101220517
NCBI-ProteinID:
XP_031741748
LinkDB
All DBs
Position
5
Genome browser
AA seq
901 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYXGPTLLEALDLIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT
VAVGVIKAVEKKDASGAKVTKSAAKKSGKYSSMGKEKTHINIVVIGHVDSGKSTTTGHLI
YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT
VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQM
ICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPEKIPFVPISGFEGDNMIERSTNL
DWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTF
APSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANF
TSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG
FVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSG
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagactcacatcaacattgtggtcattggtcatgtcgactctggcaag
tcgaccactactggccatttgatttacaagcttggaggtattgacaagcgtgttattgag
aggtttgagaaggaagctgctgagatgaacaagagatcgttcaagtatgcctgggtgttg
gacaaactgaaggccgaacgtgagcgtggtatcacaattgatattcctctgtggaagttc
gagaccaccaagtattactgcactgtgattgatgctcctgggcatcgtgatttcatcaag
aacatgattactggtacttcccaggctgactgtgctgttcttattatcgactccactact
ggaggttttgaagctggtatttctaaggatgggcagacccgtgaacacgcccttcttgca
tttacccttggtgtcaagcaaatgatttgctgctgtaacaagatggatgccaccacgccc
aagtactcgaaatctaggtacgatgaaattgtgaaggaagtttcttcctacctcaagaag
gttggctacaacccagaaaaaattcccttcgtccccatctctggctttgagggtgacaac
atgattgaaagatccaccaacctcgactggtacnaaggaccgacccttcttgaggctctc
gatctgatccaagagcctaagaggccatctgacaaaccccttcgtcttccacttcaggat
gtctacaagattggaggtattggaactgttccagtgggtcgtgttgaaactggcattata
aagcctggtatggtggtaacctttgctccatctggactgactactgaagttaagtctgtg
gagatgcaccacgaagctctccaagaagctctccctggtgacaacgtggggttcaacgtg
aagaatgttgctgtgaaggatctcaagcgtggttatgttgcctcaaattccaaggatgat
cctgccaaggaagctgccaatttcacgtcccaagttatcatcatgaaccatccaggacag
attggaaatggttatgcacctgtactcgattgccacacatctcacattgctgtcaaattt
gccgagattttaactaagattgacaggcgatctggtaaagaactggagaaagagcccaag
tttttgaagaacggagatgctggatttgttaagatgattcccaccaagcccatggtggta
gaaacattctctgcgtatccccctcttggacgatttgccgtgagggacatgcgtcaaact
gtggctgttggtgtcatcaaggccgttgagaagaaggatgcatccggcgccaaggtcacc
aagtctgcagcaaagaaatcagggaagtattcaagcatgggtaaggaaaagactcacatc
aacattgtggtcattggtcatgtcgactctggcaagtcgaccactactggccatttgatt
tacaagcttggaggtattgacaagcgtgttattgagaggtttgagaaggaagctgctgag
atgaacaagagatcgttcaagtatgcctgggtgttggacaaacttaaggccgaacgtgag
cgtggtatcacaattgatattgctctgtggaagttcgagaccaccaagtattactgcact
gtgattgatgcccctgggcatcgtgatttcatcaagaacatgattactggtacttcccag
gctgactgtgctgttcttattatcgactccactactggaggttttgaagctggtatttct
aaggatgggcagacccgtgaacacgcccttcttgcctttacccttggtgtcaagcaaatg
atttgctgctgtaacaagatggatgccaccacgcccaagtactcgaaatctaggtacgat
gaaattgtgaaggaagtttcttcctacctcaagaaggttggctacaacccagaaaaaatt
cccttcgtccccatctctggctttgagggtgacaacatgattgaaagatccaccaacctc
gactggtacaagggaccgacccttcttgaggctctcgatctgatccaagagcctaagagg
ccatctgacaaaccccttcgtcttccacttcaggatgtctacaagattggaggtattgga
actgttccagtgggtcgtgttgaaactggcattataaagcctggtatggtggtaaccttt
gctccatctggactgactactgaagttaagtctgtggagatgcaccacgaagctctccaa
gaagctctccctggtgacaacgtggggttcaacgtgaagaatgttgctgtgaaggatctc
aagcgtggttatgttgcctcaaattccaaggatgatcctgccaaggaagctgccaatttc
acgtcccaagttatcatcatgaaccatccaggacagattggaaatggttatgcacctgta
ctcgattgccacacatctcacattgctgtcaaatttgccgagattttaactaagattgac
aggcgatctggtaaagaactggagaaagagcccaagtttttgaagaacggagatgctgga
tttgttaagatgattcccaccaagcctatggtggtggaaacattctctgcgtatccccct
cttggacgatttgccgtgagggacatgcgtcaaaccgtggctgttggtgtcatcaaggcc
gttgagaagaaggatgcatcgggcgccaaggtcaccaagtctgcagcaaagaaatcaggg
aagtga
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