KEGG   Cucumis sativus (cucumber): 101220517
Entry
101220517         CDS       T02486                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC101220517
  KO
K03231  elongation factor 1-alpha
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101220517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101220517
   03016 Transfer RNA biogenesis [BR:csv03016]
    101220517
   03012 Translation factors [BR:csv03012]
    101220517
   04131 Membrane trafficking [BR:csv04131]
    101220517
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csv04147]
    101220517
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     101220517
Transfer RNA biogenesis [BR:csv03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    101220517
Translation factors [BR:csv03012]
 Eukaryotic type
  Elongation factors
   101220517
Membrane trafficking [BR:csv04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    101220517
Exosome [BR:csv04147]
 Exosomal proteins
  Proteins found in most exosomes
   101220517
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 FlpD AAA_22 G-alpha
Other DBs
NCBI-GeneID: 101220517
NCBI-ProteinID: XP_031741748
LinkDB
Position
5:complement(21083337..21094021)
AA seq 901 aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYXGPTLLEALDLIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT
VAVGVIKAVEKKDASGAKVTKSAAKKSGKYSSMGKEKTHINIVVIGHVDSGKSTTTGHLI
YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT
VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQM
ICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPEKIPFVPISGFEGDNMIERSTNL
DWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTF
APSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANF
TSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG
FVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSG
K
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgggtaaggaaaagactcacatcaacattgtggtcattggtcatgtcgactctggcaag
tcgaccactactggccatttgatttacaagcttggaggtattgacaagcgtgttattgag
aggtttgagaaggaagctgctgagatgaacaagagatcgttcaagtatgcctgggtgttg
gacaaactgaaggccgaacgtgagcgtggtatcacaattgatattcctctgtggaagttc
gagaccaccaagtattactgcactgtgattgatgctcctgggcatcgtgatttcatcaag
aacatgattactggtacttcccaggctgactgtgctgttcttattatcgactccactact
ggaggttttgaagctggtatttctaaggatgggcagacccgtgaacacgcccttcttgca
tttacccttggtgtcaagcaaatgatttgctgctgtaacaagatggatgccaccacgccc
aagtactcgaaatctaggtacgatgaaattgtgaaggaagtttcttcctacctcaagaag
gttggctacaacccagaaaaaattcccttcgtccccatctctggctttgagggtgacaac
atgattgaaagatccaccaacctcgactggtacnaaggaccgacccttcttgaggctctc
gatctgatccaagagcctaagaggccatctgacaaaccccttcgtcttccacttcaggat
gtctacaagattggaggtattggaactgttccagtgggtcgtgttgaaactggcattata
aagcctggtatggtggtaacctttgctccatctggactgactactgaagttaagtctgtg
gagatgcaccacgaagctctccaagaagctctccctggtgacaacgtggggttcaacgtg
aagaatgttgctgtgaaggatctcaagcgtggttatgttgcctcaaattccaaggatgat
cctgccaaggaagctgccaatttcacgtcccaagttatcatcatgaaccatccaggacag
attggaaatggttatgcacctgtactcgattgccacacatctcacattgctgtcaaattt
gccgagattttaactaagattgacaggcgatctggtaaagaactggagaaagagcccaag
tttttgaagaacggagatgctggatttgttaagatgattcccaccaagcccatggtggta
gaaacattctctgcgtatccccctcttggacgatttgccgtgagggacatgcgtcaaact
gtggctgttggtgtcatcaaggccgttgagaagaaggatgcatccggcgccaaggtcacc
aagtctgcagcaaagaaatcagggaagtattcaagcatgggtaaggaaaagactcacatc
aacattgtggtcattggtcatgtcgactctggcaagtcgaccactactggccatttgatt
tacaagcttggaggtattgacaagcgtgttattgagaggtttgagaaggaagctgctgag
atgaacaagagatcgttcaagtatgcctgggtgttggacaaacttaaggccgaacgtgag
cgtggtatcacaattgatattgctctgtggaagttcgagaccaccaagtattactgcact
gtgattgatgcccctgggcatcgtgatttcatcaagaacatgattactggtacttcccag
gctgactgtgctgttcttattatcgactccactactggaggttttgaagctggtatttct
aaggatgggcagacccgtgaacacgcccttcttgcctttacccttggtgtcaagcaaatg
atttgctgctgtaacaagatggatgccaccacgcccaagtactcgaaatctaggtacgat
gaaattgtgaaggaagtttcttcctacctcaagaaggttggctacaacccagaaaaaatt
cccttcgtccccatctctggctttgagggtgacaacatgattgaaagatccaccaacctc
gactggtacaagggaccgacccttcttgaggctctcgatctgatccaagagcctaagagg
ccatctgacaaaccccttcgtcttccacttcaggatgtctacaagattggaggtattgga
actgttccagtgggtcgtgttgaaactggcattataaagcctggtatggtggtaaccttt
gctccatctggactgactactgaagttaagtctgtggagatgcaccacgaagctctccaa
gaagctctccctggtgacaacgtggggttcaacgtgaagaatgttgctgtgaaggatctc
aagcgtggttatgttgcctcaaattccaaggatgatcctgccaaggaagctgccaatttc
acgtcccaagttatcatcatgaaccatccaggacagattggaaatggttatgcacctgta
ctcgattgccacacatctcacattgctgtcaaatttgccgagattttaactaagattgac
aggcgatctggtaaagaactggagaaagagcccaagtttttgaagaacggagatgctgga
tttgttaagatgattcccaccaagcctatggtggtggaaacattctctgcgtatccccct
cttggacgatttgccgtgagggacatgcgtcaaaccgtggctgttggtgtcatcaaggcc
gttgagaagaaggatgcatcgggcgccaaggtcaccaagtctgcagcaaagaaatcaggg
aagtga

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