Cucumis sativus (cucumber): 101220541
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Entry
101220541 CDS
T02486
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101220541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101220541
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101220541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101220541
NCBI-ProteinID:
XP_004149577
UniProt:
A0A0A0L293
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All DBs
Position
3:3754299..3757485
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AA seq
480 aa
AA seq
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MESDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA
ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEA
DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR
AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT
GVPHFGTANYGVGVNLEQGMRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG
NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGAFSGSGTGNFRVAYGNNDDNWSSPAVANH
VGANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVEMNNGYERSYRDLY
RDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGIAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcttggtaagctcttcattggtggaatttcgtgggatactgatgaagag
cgtcttagggaatattttggccactatggcgaagtggtcgaggctgtgatcatgagggat
cgcaccactggtcgtgctcgtggctttggttttgttgtctttgcagatcctggggtagcc
gagcgagtcattttggacaaacacgttatcgatggtcgaactgttgaagctaaaaaggct
gttccaaaggatgatcaaaacatgttgaatagaagtagtggtagcattcatggttctcct
agctcgggacgaacgaaaaagattttcgttggagggttagcttcgacggtcaccgaggct
gactttcagaagtattttgatcagtttggaacaatcactgatgttgttgttatgtatgat
cacagcacccaaaggccaaggggttttggcttcattacttatgactcggaggaatgcgtc
gaccgtgtgctacataaaactttccatgaactcaatggaaagatggttgaggttaagaga
gcaatcccgaaagagctaaccccagggcccaaccggagccctcttgtaggatataactat
ggtatgagtaggcctagtggttttcttaacagctatacacaaggctataatatgagtcct
ttgggaggttatggagtccggccagatggtaggttgagtccaataattagcagtcgaacc
ggggttcctcattttggtactgctaattatggggtgggtgtgaatttggagcaaggaatg
aggcaaggctatggcaggactttgaacattatgaatagtcaagcgcaagaacaaatgttg
aattcctattataatggcaattcaaataggtacattgccccaattggctatagtgggggc
aatggaagaggcgattctcccttaagctcgagtacgtggaatgtctggggaaatggaagt
atgagcaatgccatgagctcttctggccccggcgctttctctggctctggaacggggaac
ttcagagtggcatatggaaataatgatgataattggagttcacctgctgttgctaatcat
gttggggcaaatgttcctggctatacttttggaaacaataatggctatgcaattggagac
aataatggctttgggtttagaggaggctatggaagaaatggagtagtatcaaatgtggca
gcacgaaaagcatttgttgaaatgaacaatggttatgagaggtcatatagagacttatat
cgtgatgaagcggtgcacgatgattcgacttggcagtctaccgctcctgaactggatggt
tccgtgtcttttggttatggtctcggcaatcttgcttctgatgatccagccaaaagttct
gagagttttcttgcaagttatgatgtttcaagcagacaatcaactagaggaattgctgct
tag
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