Cucumis sativus (cucumber): 101220686
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Entry
101220686 CDS
T02486
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101220686
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101220686
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
101220686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4
Rota_NSP3
HAD_2
Prok-RING_4
Pellino_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
101220686
NCBI-ProteinID:
XP_004143429
LinkDB
All DBs
Position
6:26438336..26442624
Genome browser
AA seq
388 aa
AA seq
DB search
MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA
LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL
KDCGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
MSKNSTKSFKCPYCPTDIDATRCRQLYF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagttggatagcattaaagatgcatttgaccgtgtgacaaagaagcagaaattgtct
tcttccaaaagtcaagaagtagttgaccaaatgcatctggaactggaacaggtgctacaa
aagatacaactagctgataatccggaatgtcctattgatatgaattcagtttttgctgca
ctgaaaactaaattgaaggatattgccccactcactcagctcgaaagcacacagaaggag
ttgaatactgctctgaccaagtatccaaagcttgttgaaaaatctttcaatccagatata
tcaaaagcttatagaaacgttgattttgataggcatactgttaaccagattattgctagt
catttctatcgccagggtatgtttgaacttggtgactgctttattagtgaggccggcgag
tcagaatctgctgcttcattgaggtctccattccaggaaatgtatcagatccttgaatcc
atgaagtcccggaatctagagccagctctgaactgggctctgaataactcaaataaactt
aaggattgtgggtcggatcttttgctaaaacttcatagcatgcagttcatggagattcta
caaaagggagatagacatgatgctttgaagtacgctaggacctaccttgctcctcttgca
tccaaccacatggctgaacttcagaagcttatggcttgcctgttgtggactggaaggctt
gattgctccccatactctcattctcaattattatcagtagctaactgggataaagttgct
gaggagcttatacgacagttttgcaattttcttggtcagtcctatgagagccccttaggt
gtaacggttgcagcaggggtccagggattgcctcctctcttgaagtttatgaatgttatg
gctgggaagaaacaggaatggcaatctatgaagcagttgcctgttcctgtggagttggac
agagaatttcagttccattccatctttgtttgtccagtgtcgaaggaacagtcaaccgaa
gaaaatccaccaatgttaatgctgtgtggccatgtcctctgcaagcagtctatcatgaag
atgtccaaaaacagcacaaaatcatttaagtgcccgtattgtccaacagacattgatgct
acacggtgtaggcaattgtacttttga
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