Cucumis sativus (cucumber): 101220785
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Entry
101220785 CDS
T02486
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101220785
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
101220785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
101220785
NCBI-ProteinID:
XP_011655454
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All DBs
Position
5:complement(23338949..23399273)
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AA seq
1609 aa
AA seq
DB search
MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL
AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSST
FQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMAM
HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATID
RIFELLKLTNSEIHCWQEWLVFSDIFFFLMKSGCIDFVDFVAKLFSRVTEGGQHVLRTNH
VTWLFVQIIRVELVMSALNSDARKVETTRKIVSFHREDKNADPNNPQSILLDFISSCQNL
RIWSLNTITRECLNSEQLQKGKQIDEWWRQASKGDRIVDYMNMDDRSIGMFWVVSYTMAQ
PACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMSLLSGFSMNLCSKLAYQME
ESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSRPGVTLLVLEILNY
RLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREG
KGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFP
PVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYL
CAGAWILMQGHPESINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDI
LLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRIVISLLDRQELQQRVKLYCISR
GSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDIAARLLPIIPLIVYRLIENDAVD
QADRLLALYSPFLAYHPLRFTFVRDILAYFYSHLPNKLIVRILYVLDISKIPFSESFPTH
ISSPGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTVGDNSSSSMRPSHNKSPATNPPV
ATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQS
SNNLHVAPSSMGQGSAIPTSPSGGSTDSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSL
MIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQ
DNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLA
NAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASS
KPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTTSIYAATHPKLVQNPA
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcacaacgatcctcatcactaacgacagtctccacttcccgtgcttaccag
ttccacccagctcgagctgccattgtcaatctcttcgacctctacttaggaaggagtaat
cgtctaaagcatgaagattcagctagagaacctccgaacaaggctcaaaagcgtgtacta
gctattaacagagagcttcctcctcgaaatgagcaattccttttagattttgagcaaatt
cagaatcaattttcagaccatgatcagttgcgtgctgtgactgagtctgttctcatctcc
ctagttgtgcagtgcagtggtcatgtaccaagggcagaatttcttctctttgctttacgg
agtttatgcagtataggttacatcaattgggacacttttctgccatcccttctttcttca
atctcatctgcagaagtttccatgggtcagggaagtcaagctgcgcctactgtctcaaca
acaaatttatcacagtctggggtgcttccatcctcaaatccagtgcctaatagttctacc
tttcagtcttccaatcctgcctctccattaccattggttcatggaatcagttcacccgct
cagtctagtattgatccatcttcttgcacagcattgtcaccaatcaaatcctctgatctt
tctgggactggattgccatctgcagttagggtcaattcatttttgagaaataatgcaata
agcagtcttcgtcagctttgttgcaagattatcttaagtggtcttaaatttgatttaaaa
ccagtgactcatgctgatatcttttcccacatgctcaattggatggttaattgggaccaa
cggcaacaggggatggaggaatctgagaatatgaaatcctggaggcctgacaaggctctc
attgaatggctacatagctgtttggatgtagtctggcttttggttgaggagaataaatgt
cgggtgcccttctatgaattactacgcagtggtttgcaattcattgataacattcctgat
gatgaagccttatttacactcatgttggagatccataggaggcgagatatgatggcaatg
cacatgcagatgttggatcaacaccttcacagccctacatttggcactcaacggattttt
tctcaaacaatgcagaacatatctggtgaagcagtagcaagcttgcgctattcaccaatc
acatacccaagtgttcttggtgaacctcttcatggcgaggatattgcatctgctattcag
agaggaactcgagattgggaaagagctatgcgttgtataaggcacgctcttcgcacaact
ccatcaccggactggtggaagcgtgtgcttcttgtggctcctggctataggtcttctgca
caaggactcagtcctggtgcagtttttacatccgagatgatatgtgaggcgacaattgat
agaatatttgagcttttgaagttgacgaattcagagatacattgctggcaagagtggctt
gttttctcggatatattcttttttctgatgaaaagtggatgtatcgattttgtggacttt
gtggctaagctgttctctcgcgtgacagagggaggtcaacatgttttaaggacaaatcat
gtcacttggctgtttgtacaaatcatccgggttgaacttgtgatgagtgctttgaattca
gatgcaaggaaggtggagactacaagaaaaatagtatcatttcatagagaagataaaaat
gctgatccgaataatcctcaaagcatcctgcttgattttattagcagttgtcagaacttg
cgtatttggtcactaaatacaataacaagagaatgtttgaatagtgagcagctacagaaa
ggaaaacaaattgatgaatggtggagacaagcaagtaaaggtgatcggatcgtggattat
atgaacatggatgacagatcaattgggatgttttgggttgtctcatacacgatggcacaa
ccagcatgtgaaactgtgatgaattggttaacttctgcaggagctccagaattatcatca
gcacaaaatttacagaccaatgagaggataatggttatgcgagaagtgagcccactgccg
atgtctttgttatcaggtttttcaatgaacttgtgctcgaagctggcatatcaaatggag
gaatccttattttctggacaggctgttcccagtattgcattggctgaaacatatactagg
ttgcttctccttgcaccacactcattgtttcgctcgcattttaatcatttagcacaaaga
aacccatccctattgagcagaccaggagttacgcttctagtgcttgaaattttgaactat
cggttgcttcctctatacaggtaccaaggcaagagtaaggctttgatgtatgatgtgaca
aaaataatctctgcactcaaaggaaagcgtggagaccatcgagtatttagattggctgaa
aacttgtgcatgaatcttattttttcattaagagattttttctttgtgaaaagggaaggg
aagggtccaactgaatttacggagacactaaatcgattagccgtggtcactcttgctatc
ctcattaaaacacggggaatagctgatgctgatcacttgctttatcttcaaacaatgcta
gagcagacaatggccacaagtcagcatacttggtcagaaaaaactctccgatacttccca
ccagttcttcgtgaagtgttgattggaagaattgataaaagaggtgtagctattcaagca
tggcaacaggcagaaaccactgtgatcaaccaatgcaaccaactactttccccatcagct
gatccaacatatgtgatgacctacatcagtcatagttttccgcagcataaacaatattta
tgtgctggtgcatggatacttatgcaagggcatcctgaaagtattaactgcacgaccttg
gcacgggtattgagagaattttcacctgaagaagtaacagctaatatttacacaatggta
gatgtgctgcttcatcacattcagattgaacctcagcatggacattccacacaggatatt
ttacttaaagtttgtgccaatctttcattctttgtatggactcaagaattacttcctctt
gatattctgctcctagctttcattgaccgtgatgatgatcccaatgctctacgcatagtg
attagtctacttgataggcaagagcttcaacaacgagtcaaactatattgtatcagccgg
ggttcgcctgagcactggcttcactccgtagtgttcaaaagaaatgaattacaaaaggct
cttgggaatcatctttcatggaaggacaggtatcctgtattttttgacgatattgcagct
cgattacttccgatcattccattgatagtttataggctcattgaaaatgatgctgtagat
caagctgatagattgctggccttgtattctccatttttggcctaccaccctcttagattt
acatttgttcgtgatatacttgcatacttctacagtcatcttcctaacaagctcattgtt
cgaattttgtatgtacttgatatcagcaagattccattttctgagtcattcccaacgcac
attagttcccctggtcctgtcatgtgcccaccaatggattactttgctaccctcttgttg
gggctagtcaataatgttataccttccttacagacatcaaaatctggaaccgtaggtgat
aattcaagtagttcaatgcgtccatcgcataacaaatcccctgcgacaaatccaccagtg
gcaacaagtgctcccgagagccaaaaagcattttatcaaattcaggaccctggcacatat
actcaacttgttcttgaaacagcagttatagaattactctctctccctgtctcagctggt
cagattgtgtcatcgctggttcagatcgttgtcaacatacagcctactctaattcaatca
agcaacaatttgcatgtagctccgagcagtatgggtcagggatcagcgatacctacatct
ccctctggaggaagcacagactccttgaatgccggaagatcaaatacctcggtatctgga
ataaatactcccaactttgtttcacgaagtgggtacacatgccaacaactttctagccta
atgatccaagcatgtggcctactattagcacagcttcctcaagaatttcatggacaactg
tatctagaggcatcacgcattataaaagaaacttggtggttgtctgatgcaacaagatcc
ttaggagaactaaattctgctgttggttattcgttgatggatccaacatgggcagcacaa
gacaatacctcaacggctattggtaacacggttgcacttctgcactctttattcagtaac
ctcccacaggaatggctagaaggggcccatgtgattatcaaacatctcagacctgtcaca
tcggtagcaatgctgagaatagttttccgtattattggtccactgctccccaaacttgcc
aatgctcatagcttattttgtaagactctctcctcacttctgagtgtaatggtggatgta
tttgggaagaactcacaaacatcaataccagttgaagccgcagaaatagcagacctcatt
gactttctccaccacgttgtccattatgaagggcagggagggcctgttgtagctagcagc
aagcctcgacaagaagttctggccattatcggaagagctttagaaaatctccgcccagat
gtgcaacacctcctttcccacttgaagcctgacactactacttctatatatgcagcaaca
catcctaaactggttcaaaatccagcttga
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integrated database retrieval system
