Cucumis sativus (cucumber): 101220827
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Entry
101220827 CDS
T02486
Name
(RefSeq) LOW QUALITY PROTEIN: exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101220827
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101220827
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101220827
NCBI-ProteinID:
XP_031741217
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Position
5:complement(31113335..31115292)
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AA seq
456 aa
AA seq
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MSIINFNIITALIAFILLLYVSIATAQSSTGAATQPGGAAAQPGGATVQPTAAANSSGGA
TVQPTAAANSSGGAGGVFDVTKYGAKPNADITQALATAWKEACASAGPSKVIIPSGTYTL
GAIELKGECTSTPIEMQVQATLLAPPDLKGEDWVHFKYVNDLSVSGGGVFDGQGKKXWES
NDCHKNPKCAPMPMSLKFSFIKNSVVSGITSKDSKNFHIQVLGCNNFTLQNVNVNAPGTS
INTDGIHLGRCVGINILNSNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNA
EEPVEGLQVKNCTITGTTSGLRIKTWPASPAAGVASDMHYEDIVMNNVSNPIMIDQEYCP
YNKCNKQIPSKVKISKVSFKNIRGTSGNAQAVTLVCSSSNPCEGVELADIDLTYTGNEGP
ITSVCANVKPTITGKQNPPICSPLAPKAQSPAATTS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagtataatcaacttcaacatcatcactgctctcatcgccttcatcctactattatat
gtttccatcgcgactgcccaatctagtactggtgccgccacccaacctggtggtgccgct
gcccagcctggtggtgccaccgtccaacctactgccgccgccaattctagtggtggtgcc
accgtccaacctactgccgccgccaattctagtggtggtgctggtggcgtttttgatgtg
acaaagtacggtgctaaacccaatgctgatatcactcaggctttggcaactgcatggaag
gaagcttgtgcatcagcgggtccaagtaaagtaattattcctagcgggacttacacctta
ggtgcaattgagttaaaaggtgaatgcacaagtactcccatcgaaatgcaagtacaagca
acattgctagcaccaccagatctaaaaggtgaagattgggttcatttcaagtatgtcaat
gatttgtcagtatcaggaggtggagtttttgatgggcaaggaaaaaaancttgggaaagc
aacgattgtcataaaaacccaaaatgtgcaccaatgcccatgagtttgaagttcagcttt
ataaagaattcagttgtgagtggcataacctctaaagatagcaagaacttccatatccaa
gtactcgggtgcaataactttaccctccaaaacgtaaatgtaaatgcaccaggaactagc
attaacactgatggaattcacctcgggcgttgtgttggaattaatatattaaactcaaac
atcggtactggagacgattgcatctcacttggagatggaagcaaacaagtaacaatcaca
aatgtgacatgtgggcctggacatggcataagcgtaggaagtctaggaaggtataatgct
gaagaaccagttgagggacttcaagttaagaattgtacgataactggtacaacaagtggg
ttaagaattaaaacatggccagcttcacctgctgctggagtagcttcggacatgcattat
gaagatatagttatgaataatgtctcgaatcccattatgatagatcaagaatattgtcca
tataacaaatgcaataaacagataccatctaaagtgaagatcagcaaggtgagtttcaag
aatatcagaggtacttctggaaatgcacaggcagtaactcttgtgtgtagttcaagtaat
ccatgtgaaggtgtggagttagctgacattgacctcacatacactgggaacgaaggtccc
attacttctgtatgcgcaaatgtgaagcccactattactggaaaacaaaaccctcctatt
tgttctccgcttgctcccaaagctcaatcacctgctgcaaccacttcatga
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