Cucumis sativus (cucumber): 101220897
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Entry
101220897 CDS
T02486
Name
(RefSeq) RAB6A-GEF complex partner protein 1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101220897
Membrane trafficking [BR:
csv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
101220897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_Prp19
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
101220897
NCBI-ProteinID:
XP_031743077
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Position
6:514739..528810
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AA seq
1142 aa
AA seq
DB search
MYMAYGWPQVIPLESSLCPSSQQIIYLKVVNRLLLVVSPTHLELWSSAQHRIRLGKYKRD
SDSVQREGENIQAVWSPDTKLIAILTSSFFLHIFKVQFTDRKIHFGGKQPSGLSFATVSL
VLSEQVPFAARDLTVSNIVSDSRHMFIGLSSGSLYSISWKGEFYGAFDIDLHTRDHNEIG
LPSLPLDNGLAYKSSTRILKTNHDVKQSVIIKLDLCLPLRMLFVLYSDGKLVQCSVSKKG
LKYTDAIKAEFFFGTVDAVCTSVAPNQQILAVGSRRGVVELYDLADSASLFRSVSLHDWG
YSVEDTGYVSCIAWTPDNSAFAVGWKLRGLAVWSISGCRLMSTIRQVGLSSVSSPMVKPN
QDCKYEPLIGGTSLIQWDEYGYKLYAVEERTSERILAFSFGKCCLNRGVSRTTHIRQVIY
GDDRLLIVQSEDSDELKMLNVNLPVSYISQNWPIQHVAASEDGMYLAVAGLHGLILYDIR
VKKWRVFGDITQEQKIKCEGLLWLGKIIVVCNYTESSNMYELLFFPRYHLDQSSLLCRKP
LPGKPVVMDVHQEYILVTYRPFDVHIFHLTLLGELTLSSTPKLQLSTVRELSIMTAKSHP
ASMRFIPEQFPKEGISNSHISSSPTLVREPARCLILRANGELSLLDLDDGRERELTDSVE
LFWVTCGHSEDKTNLIEEVSWLDYGHRGLQVWYPSPGVDSFKQEDFLQLDPELEFDREVY
PLGLLPNAGVVVGVSQRMSFSASTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALRLAR
LSAEKPHFSHCLEWLLFTVFDAEISRQNVNKNQNTAAKYANKLSLLEKTCELIKNFSEYH
DVVVSVARKTDARHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYC
ASRLLQATLDESLYELAGELVRFLLRSGRDYDHASADSDKLSPRFLGYFLFRSSRNQTFD
RSSSFKEPSAHVTSVKTILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGSARL
KDFASGLELIGEKLQMGTLQSRLDADFLLAHMCSVKFKEWIVVLATLLRRSEVLSDLFRH
DLRLWEAYKSTLQSSFVEYHDLLEDLNERLTSAEKLEESQTGRSTFDQASINMLTESEAE
QY
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcctatggatggccccaggtcatcccccttgaatcttccctttgcccatct
tctcagcagatcatttaccttaaggtcgttaatcgtttactactcgttgtttctcccact
catctcgaactctggagctcagcccagcatagaataagattggggaagtacaagcgagat
tcggattcagtgcagagggaaggagagaatattcaggctgtgtggagtcctgataccaaa
ttaattgccattcttacatcatctttctttctccacatctttaaggtccaattcacggat
agaaagatacactttggaggaaaacagccctctggtttgtcttttgccaccgtctctttg
gttcttagtgagcaggtgccttttgcagcaagggacttgacagttagcaacattgtaagc
gacagcaggcatatgtttattgggctttctagtggatctttatacagtatatcctggaag
ggagagttctatggggcctttgatattgatcttcatacccgtgatcacaatgaaattggc
ctaccttctcttcctctggacaatggtcttgcttataaaagttctacaaggattctcaag
accaatcacgatgtcaagcaatctgttatcataaagttggacctttgtctacctctgagg
atgctctttgtgctttattctgatggaaagctagtgcaatgttctgtaagcaagaagggc
ttaaagtacactgatgctattaaggctgaatttttttttggtactgtagatgctgtgtgt
acatctgtcgctccaaaccaacaaatccttgcagtaggctccagaagaggggttgttgaa
ttatatgatctagcagattctgcctccctctttcgttctgtttctttgcatgactgggga
tattctgtagaggacactggttatgttagttgcattgcctggacaccagataattctgct
tttgcagttgggtggaaattaagagggctagctgtatggtccatttctggttgccgtttg
atgtcaactatccgccaagttggtttaagttctgtatcatctccaatggttaaaccaaac
caagactgcaaatatgaacctttaattggtggtacttcgctgatccagtgggatgaatat
ggttacaagctttatgctgttgaggaaagaacgtcagaaagaatacttgcattttctttt
ggcaagtgttgccttaacagaggcgtttctcgcacaacacacatacggcaagtaatatat
ggtgatgatcgactgctcattgtgcaatcagaagatagcgacgaacttaaaatgcttaat
gttaaccttccggtctcttatatttctcaaaattggcctattcaacatgttgcagctagt
gaggatggtatgtatttagcagttgccggtctacatggtctaatcttgtatgatattcgg
gtgaaaaagtggcgcgtatttggggatattactcaagaacaaaaaattaagtgtgaaggt
ttattatggctggggaagattatcgtagtttgcaactacactgaatcttctaacatgtat
gagttgcttttcttcccaaggtatcaccttgaccagagttctttactgtgtcggaaacca
ctgcctggaaaacctgtggtgatggatgtacatcaagaatatatactagtcacctatcga
ccatttgatgttcacattttccatttgacattacttggtgaattgacattatctagtacc
cccaaattacagctttctacagtaagagaattgtcaattatgactgcaaagagccatcca
gcatcaatgcggtttattcctgaacaattcccaaaagaaggcatttcaaacagtcatatc
tcttcttctcccacattagttcgagagcctgcaagatgtttgattttgagagcaaatgga
gaactttctcttctggatttggatgatggacgagaaagggagcttactgattctgttgaa
ttattctgggtcacttgtggtcattcagaggataaaacaaatctaattgaggaagtttct
tggttggattatggtcatcggggactgcaggtttggtatccttctccaggcgtcgactcc
tttaagcaggaggatttcttgcagctggatccagagttggaatttgatcgggaggtatac
ccacttggacttctcccaaatgctggtgttgttgtaggtgtatctcaaagaatgtcattt
tctgcaagcacagaatttccatgttttgagccatcacctcaagctcaaaccatactgcat
tgcctattacggcatcttctacagagagataaaagtgaggaagctctaaggttggcacga
ttatcagcagagaagcctcacttttctcattgtctagaatggcttctttttacagttttt
gatgcagaaatatccaggcaaaatgtgaacaagaaccagaatacagcggctaaatatgca
aacaagctgtcacttttggaaaagacatgtgagctgataaagaatttctctgagtatcac
gatgtagttgtaagtgttgcaagaaaaactgatgctcgacattgggccgatttgttctcc
gctgctggaagatcaacagagctgtttgaggagtgcttccagcggaggtggtatcgcact
gcagcctgttacatacttgtgattgcaaaacttgaaggccctgcggttagtcagtactgc
gcttcacgcctattgcaagcaacactagacgaatccttgtatgagcttgctggagagctg
gtgaggtttctgctgagatctggaagagactacgatcatgcatcggcagattcagacaaa
ctatcacctcgattcttgggctattttctttttcgttctagcaggaaccaaaccttcgat
agaagttcatcattcaaggagccaagcgcacatgttacttctgtcaaaaccattttggaa
agtcatgctagctatttgatgtctgggaaggaattatcaaagcttgtagcatttgtcaaa
ggaactcagtttgatttagtggagtatctccaaagggagagatatggaagtgctcgttta
aaggattttgcatcagggcttgaactaattggggagaagcttcaaatgggaacacttcaa
agccggttggatgcagatttcctcttggctcatatgtgctccgttaagtttaaggaatgg
attgttgttttagccactcttctaagacggtctgaagttctgtctgatctatttaggcat
gatctacggttgtgggaagcatacaagagcaccctacagtcatcatttgtagagtatcac
gatctgctcgaagacttgaacgaaagacttacgtcagcagaaaaattggaggaatcgcaa
accggtcgaagtacatttgatcaagcaagcatcaacatgttaacagagagcgaagcagag
cagtattaa
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