KEGG   Cucumis sativus (cucumber): 101220930
Entry
101220930         CDS       T02486                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
csv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101220930
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101220930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101220930
   04131 Membrane trafficking [BR:csv04131]
    101220930
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101220930
Membrane trafficking [BR:csv04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    101220930
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    101220930
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    101220930
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd WDR55 Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EIPR1 Beta-prop_IFT140_1st NBCH_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_2 Beta-prop_WDR75_1st Beta-prop_HPS5 DSE1_N Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 101220930
NCBI-ProteinID: XP_004147452
UniProt: A0A0A0LG36
LinkDB
Position
3:complement(34141740..34143677)
AA seq 301 aa
MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW
QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL
ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPMTAPGSLVGSSSEDPVWKLA
SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcttcgcaaaagattgaaactggccatcaagatatggttcatgatgtacaaatggat
tactatggcaaacgcatagcgacagcttcctctgattttaccattaaaattgttggcgtt
agcaaagactctggttcacaaatcttagctaccttaaatggtcataaaggcccagtttgg
caagttgcttgggcgcaccctaagtttggttcaatggtagcttccagctcttatgatggt
caagtgataatctggaaggaaggaaatcaaaatcaatggtctcaggctcatgtttttagt
gcacacaagtcttcggtgaactctattgcctgggcaccacatgaacttggcctctgtttg
gcctgtggatcatctgatggaagtatatcggtctttattgccagatctgatggtggctgg
gacaataatccaattgaacaagcccaccctgttggagtaacctcagtttcatggggccct
atgacggctcctggttccttagttggatccagttcagaggatcctgtttggaagctagct
tccgggggcttcgatagttcagtgaaggtttggacactcaaagatggaagctggaggagg
gattcctccctttcccttcagattcacactgattgggtgagagatgtggcttggtcgcca
aacctagggcttcaaaaatccaccattgcaagtggttctcaggatgggacagtgattatt
tggtcaacaaaggaaggagggaaatgggatgctacactggtgaatgattttaagactccc
atctggaaggtttcgtggtcattgactggagacttgttggctgtttctgatgggaataac
catattaccttgtggaaagaaggaaccggtggtaaatggcagcaagtaactacagttgaa
ccttag

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