KEGG   Cucumis sativus (cucumber): 101220994
Entry
101220994         CDS       T02486                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101220994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101220994
   03009 Ribosome biogenesis [BR:csv03009]
    101220994
   04131 Membrane trafficking [BR:csv04131]
    101220994
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csv04147]
    101220994
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     101220994
Ribosome biogenesis [BR:csv03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    101220994
Membrane trafficking [BR:csv04131]
 SNARE
  SNARE associated proteins
   Others
    101220994
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    101220994
Exosome [BR:csv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101220994
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 CDC48_2 AAA_5 AAA_33 AAA_22 AAA_14 TIP49 NPHP3_N RNA_helicase nSTAND3 AAA_28 AAA_17 Mg_chelatase ATPase_2 AAA_18 Parvo_NS1 IstB_IS21 Viral_helicase1 ABC_tran NACHT AAA_7 Vps4_C AAA_24 NB-ARC TsaE AAA_lid_PRS2_C DUF815 Zeta_toxin Sigma54_activat Sigma54_activ_2 Zot
Other DBs
NCBI-GeneID: 101220994
NCBI-ProteinID: XP_004143268
UniProt: A0A0A0KK93
LinkDB
Position
6:complement(22913130..22919504)
AA seq 807 aa
MANQAESSDSKGPKRDFSTAILERKKAANRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCDGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSD
NPSSGTAAADPFATSAGGGADDDDLYN
NT seq 2424 nt   +upstreamnt  +downstreamnt
atggccaatcaagctgaatcctccgactctaagggtcccaagagggattttagtaccgcg
attctagaacgtaagaaagctgccaaccggcttgttgttgatgaggccattaatgatgat
aactcggtggttgcgcttcaccctgacactatggagaagcttcaactcttccgtggcgac
acgatcttgatcaaggggaaaaaaaggaaggatacaatctgcattgctcttgccgatgaa
acatgtgatgagccaaaaataagaatgaacaaggttgtgagaagcaaccttcgcgtcagg
cttggagatgttgtctccgtgcatcaatgtgctgatgttaagtatggaaagcgggtacac
attcttccagtagatgacactattgaaggtgtcaccgggaatctttttgatgcatacttg
aaaccgtatttcttggaagcctatcgcccagtgaggaagggtgatctcttccttgtgagg
ggaggaatgagaagtgtcgagttcaaggtcattgaaactgatcctcctgaatattgtgtg
gttgcccctgatactgaaattttctgtgatggggagcctgttaaaagagaggacgaagat
agattagatgaggttggctatgatgacgttggtggtgttagaaaacaaatggcacaaatt
cgtgaattggtagaacttcctctgagacatccacagctttttaaatccatcggagtaaag
ccaccaaagggaattctgctttatggcccccctggatctggaaagactttgattgccaga
gccgtagctaatgaaactggggctttctttttctgtatcaacggaccagaaattatgtca
aagttggctggagagagtgaaagcaaccttaggaaagcttttgaggaggcagaaaagaat
gctccatctatcatctttattgatgagattgattcgattgctcctaagcgagaaaaaact
catggagaagttgagagaaggattgtgtctcagctcttgacactaatggatgggttaaaa
tctcgtgcccatgtcattgttattggagctacaaatcggccaaacagcattgatccagct
ttgagacgatttggaaggtttgatagggaaatagatattggggttcctgatgaagttggg
cgacttgaggttcttcgtatccataccaagaacatgaagcttgctgaagatgttgacttg
gaaagaattgccaaggatacacatgggtatgttggagctgacttggcagctctttgtacc
gaggctgcacttcaatgcattagagaaaaaatggatgttattgatttggaagatgaaaca
atcgatgcggagattctgaattcaatggcagtcacaaatgagcacttccaaactgctctt
gggaccagtaatccatctgctctacgtgaaactgttgttgaagtgcctaacgtcagctgg
gaagacattggaggacttgagaatgtcaagagagaacttcaagagactgtacaatatcca
gtggaacatcctgagaagtttgagaaatttggaatgtcaccctcaaagggagttcttttt
tatgggcctcctggatgtggaaaaactcttctggccaaagctattgccaatgagtgccag
gcaaacttcatcagtgtcaagggtcctgaattgcttacaatgtggtttggagaaagtgaa
gctaatgttcgtgaaatttttgacaaggctcgccagtctgcaccttgtgttctgttcttt
gacgagcttgactctattgccactcagagaggcagcagcgtgggagatgctggaggtgct
gctgatcgagttttgaaccaacttctgacagaaatggatggaatgtcagcaaagaaaact
gtctttataattggggcaaccaacagaccggatattatagatcctgcacttctccgtcca
ggacgtttagatcaattgatttatattcctctacctgacgaggattctcgacaccaaatt
ttcaaggcttgcttgaggaagtcgccagtatcaaaggatgttgaccttagagcccttgcc
aagtacactcaaggttttagtggtgctgatattacagagatctgccagcgtgcttgcaaa
tatgctatcagagagaatattgagaaagatattgagagggagaggaggagaagagataac
cctgaggctatggaagaggatgtagaggacgaggtggcagagattaaggctgctcatttt
gaggagtcgatgaagtttgctcgcagaagtgtgagtgacgccgatattcgtaaataccag
gcatttgctcaaacactgcagcagtcgagagggtttggttcagaattcaggttttcagac
aacccttcttctggaactgcagcagctgacccgtttgcaacttcagctggtggtggggct
gatgatgatgatctttacaactag

DBGET integrated database retrieval system