Cucumis sativus (cucumber): 101220994
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Entry
101220994 CDS
T02486
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101220994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101220994
03009 Ribosome biogenesis [BR:
csv03009
]
101220994
04131 Membrane trafficking [BR:
csv04131
]
101220994
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101220994
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101220994
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101220994
Membrane trafficking [BR:
csv04131
]
SNARE
SNARE associated proteins
Others
101220994
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101220994
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101220994
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
nSTAND_NTPase5
Viral_helicase1
ABC_tran
NB-ARC
NACHT
AAA_7
Vps4_C
TsaE
IstB_IS21
AAA_lid_PRS2_C
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
101220994
NCBI-ProteinID:
XP_004143268
UniProt:
A0A0A0KK93
LinkDB
All DBs
Position
6:complement(22913130..22919504)
Genome browser
AA seq
807 aa
AA seq
DB search
MANQAESSDSKGPKRDFSTAILERKKAANRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCDGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSD
NPSSGTAAADPFATSAGGGADDDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcaagctgaatcctccgactctaagggtcccaagagggattttagtaccgcg
attctagaacgtaagaaagctgccaaccggcttgttgttgatgaggccattaatgatgat
aactcggtggttgcgcttcaccctgacactatggagaagcttcaactcttccgtggcgac
acgatcttgatcaaggggaaaaaaaggaaggatacaatctgcattgctcttgccgatgaa
acatgtgatgagccaaaaataagaatgaacaaggttgtgagaagcaaccttcgcgtcagg
cttggagatgttgtctccgtgcatcaatgtgctgatgttaagtatggaaagcgggtacac
attcttccagtagatgacactattgaaggtgtcaccgggaatctttttgatgcatacttg
aaaccgtatttcttggaagcctatcgcccagtgaggaagggtgatctcttccttgtgagg
ggaggaatgagaagtgtcgagttcaaggtcattgaaactgatcctcctgaatattgtgtg
gttgcccctgatactgaaattttctgtgatggggagcctgttaaaagagaggacgaagat
agattagatgaggttggctatgatgacgttggtggtgttagaaaacaaatggcacaaatt
cgtgaattggtagaacttcctctgagacatccacagctttttaaatccatcggagtaaag
ccaccaaagggaattctgctttatggcccccctggatctggaaagactttgattgccaga
gccgtagctaatgaaactggggctttctttttctgtatcaacggaccagaaattatgtca
aagttggctggagagagtgaaagcaaccttaggaaagcttttgaggaggcagaaaagaat
gctccatctatcatctttattgatgagattgattcgattgctcctaagcgagaaaaaact
catggagaagttgagagaaggattgtgtctcagctcttgacactaatggatgggttaaaa
tctcgtgcccatgtcattgttattggagctacaaatcggccaaacagcattgatccagct
ttgagacgatttggaaggtttgatagggaaatagatattggggttcctgatgaagttggg
cgacttgaggttcttcgtatccataccaagaacatgaagcttgctgaagatgttgacttg
gaaagaattgccaaggatacacatgggtatgttggagctgacttggcagctctttgtacc
gaggctgcacttcaatgcattagagaaaaaatggatgttattgatttggaagatgaaaca
atcgatgcggagattctgaattcaatggcagtcacaaatgagcacttccaaactgctctt
gggaccagtaatccatctgctctacgtgaaactgttgttgaagtgcctaacgtcagctgg
gaagacattggaggacttgagaatgtcaagagagaacttcaagagactgtacaatatcca
gtggaacatcctgagaagtttgagaaatttggaatgtcaccctcaaagggagttcttttt
tatgggcctcctggatgtggaaaaactcttctggccaaagctattgccaatgagtgccag
gcaaacttcatcagtgtcaagggtcctgaattgcttacaatgtggtttggagaaagtgaa
gctaatgttcgtgaaatttttgacaaggctcgccagtctgcaccttgtgttctgttcttt
gacgagcttgactctattgccactcagagaggcagcagcgtgggagatgctggaggtgct
gctgatcgagttttgaaccaacttctgacagaaatggatggaatgtcagcaaagaaaact
gtctttataattggggcaaccaacagaccggatattatagatcctgcacttctccgtcca
ggacgtttagatcaattgatttatattcctctacctgacgaggattctcgacaccaaatt
ttcaaggcttgcttgaggaagtcgccagtatcaaaggatgttgaccttagagcccttgcc
aagtacactcaaggttttagtggtgctgatattacagagatctgccagcgtgcttgcaaa
tatgctatcagagagaatattgagaaagatattgagagggagaggaggagaagagataac
cctgaggctatggaagaggatgtagaggacgaggtggcagagattaaggctgctcatttt
gaggagtcgatgaagtttgctcgcagaagtgtgagtgacgccgatattcgtaaataccag
gcatttgctcaaacactgcagcagtcgagagggtttggttcagaattcaggttttcagac
aacccttcttctggaactgcagcagctgacccgtttgcaacttcagctggtggtggggct
gatgatgatgatctttacaactag
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