KEGG   Cucumis sativus (cucumber): 101221072
Entry
101221072         CDS       T02486                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03030  DNA replication
csv03410  Base excision repair
csv03420  Nucleotide excision repair
csv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101221072
   03410 Base excision repair
    101221072
   03420 Nucleotide excision repair
    101221072
   03430 Mismatch repair
    101221072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csv03032]
    101221072
   03036 Chromosome and associated proteins [BR:csv03036]
    101221072
   03400 DNA repair and recombination proteins [BR:csv03400]
    101221072
DNA replication proteins [BR:csv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101221072
  DNA Replication Termination Factors
   ELG1-RFC complex
    101221072
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101221072
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101221072
  Check point factors
   HRAD17(Rad24)-RFC complex
    101221072
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 DUF815 ABC_tran AAA_22 RuvB_N RsgA_GTPase AAA_23 AAA_29 AAA_16 AAA_5 AAA_2 Mg_chelatase TsaE nSTAND1 T2SSE FtsK_SpoIIIE nSTAND3 AAA_11 RNA_helicase ATPase_2
Other DBs
NCBI-GeneID: 101221072
NCBI-ProteinID: XP_004144654
UniProt: A0A0A0KYY3
LinkDB
Position
4:complement(22088440..22094514)
AA seq 354 aa
MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG
PSADKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN
RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
CLNVRINGPTEEQIFKVLEYIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY
PFVSNQAIPPMDWEEYITEIASEIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtcgacaagtatcgtccaaaaaccctagaccagatcacagttcaccaagat
gtagcacagaatctcaagaaattggttaatgaacaggactgccctcatttgctcttttat
ggcccctccggttctgggaagaaaaccctagtcatggcccttatccggcagatgtttgga
cccagtgcggataaggtgaaggtggagaacaaaacgtggaaagttgatgctggaaccaga
actattgatatagagttgacaaccttgtcaagtgccaaccatgtggagctcactcctagt
gatgcaggtttccaagataggtatattgttcaagagataatcaaagaaatggcaaaaaac
agaccaattgattccaaagggaaaagaggacataaagttttggttctaaatgatgttgat
aaactatcaagagaagctcagcactctcttaggagaacaatggagaaatatagctcgtac
tgtaggttaattctttgctgcaatagttcatcaagagttactgaagcaatccgctctcgc
tgcctaaatgtgcggataaatggacctacagaggagcagattttcaaggttttagagtac
attggaaagaaagaaggactgcaacttccatctggatttgcttcccgtattgcagaaaaa
tcaaacaggagtttgaggagagctatactatcatttgagacttgccgtgttcaacagtat
ccttttgtcagcaaccaggcaataccaccaatggattgggaggagtacatcactgagata
gcatctgaaataatgaaggagcagagtcccaaaagattattccaggtccgtgggaagtta
tatgagttactggttaattgtatccctccggagatcatattgaagagattgctttatgag
ttactcaagaaattggatgctgaattaaagcatgaggtctgtcattgggctgcatattat
gaacacaggatgcgtcttggacagaaagccatcttccacatagaagcttttgtggcgaag
ttcatgagcatatacaagactttcctcatttcaacattcggctaa

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