KEGG   Cucumis sativus (cucumber): 101221089
Entry
101221089         CDS       T02486                                 
Name
(RefSeq) autophagy-related protein 13b
  KO
K08331  autophagy-related protein 13
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:csv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    101221089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csv04131]
    101221089
   03029 Mitochondrial biogenesis [BR:csv03029]
    101221089
Membrane trafficking [BR:csv04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    101221089
   Atg1 complex
    101221089
Mitochondrial biogenesis [BR:csv03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    101221089
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 101221089
NCBI-ProteinID: XP_004148643
LinkDB
Position
6:complement(24429356..24437233)
AA seq 644 aa
MASSHNTHSETAKVEQILTEFFPKTLQIILESRAPCISSRNFSGEQVLSSPSSSSSSSSS
MRPRDKWFNLALRECSATLENIDLWRPNYHEPMVVDVILVQRQFGLDSVSASPRKDLVRN
LSLKEKYPLSFNSDKDEFGSQTKSEKVVERWMVHYESRKNRDSNSGSRRSSNSTAHTYKK
TILLLRSLYAFVRLLPAYKVFQDISSSGQIHPFTLAHRVSSFAEPFTRREEAEMQRFVFT
PVDTSCGRLCLSVLYRSSLSDINSEPSTPMSPQVIPEYVGSPLADPLKRFPTLPVTIAPS
HGSPSSLPFSRRHSWSYDRFRPSPPSVSFSPSPTHSESHALISNPAFPRLPPSSLPSQLP
EMVTGHKDNMNYDEYYPSPVFSQSPSLSPPIRIRVKRLPNGLLQSESAPPSAPIAKLPHS
PALSSKPNLPPSPPLKASGAIISRINRDVGPLPAGSAIGKSSSLGRDESQRISGWRVSSN
NSPISRSSSRSFPDDLDDPEFPCPFDVDEDEMTDRGSRPESFDQKGNLCDMLEPGGFFPI
RKSQDAAVGALVRMLQKAPPLRQDFTNSTADLGQPPTPDSPSRNIQRGNQISESLALKSR
YAPSSSIAASGLFVPKTTADALEELQSYREMKNLLIRQAGKTHT
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggcttcttctcataatactcattccgagactgcaaaagttgagcaaattttaactgaa
ttctttcctaaaacgctacaaattatactggaatcgagggccccttgtatttcatcgcgt
aattttagtggcgaacaagttttgtcttctccatcttcttcctcctcgtcttcctcgagt
atgaggccgagggataaatggtttaatttggctcttcgtgaatgctctgcaacgttagag
aatattgatctctggcgtccgaattatcatgaacctatggttgttgatgttattttggtg
cagaggcaatttggtttagattctgttagtgcttctcctaggaaagatcttgttaggaat
ttgtctctgaaagagaaatatccactctctttcaattctgataaggatgagtttggaagt
cagaccaagagtgagaaagttgtagagcgatggatggtgcattatgagagtaggaaaaac
cgggatagtaattcgggtagcagaaggtccagtaatagtactgctcacacctacaagaaa
accattttactcttaaggtctttatatgcctttgtgagacttttacctgcctataaggtt
tttcaagatatcagttcatctggtcagattcacccttttactcttgctcatcgtgtgtct
tcctttgctgagcctttcacccggagggaagaggccgaaatgcagcgatttgtgttcact
cctgtcgacacttcttgtggtcgactatgcctctcagtgttataccgttcatccctctct
gacataaactctgaaccatcaactcctatgtctcctcaagttattcctgaatatgttggg
agtccattggcagatccattgaaaaggtttcctaccctccctgtaacgatagcaccatct
catggatctccatcgtcgttgccattctcaagacgtcatagttggagttatgaccgtttt
agaccttcccctccttcagtctccttttcaccttcaccaacacattcagagtctcatgct
ttaatttcaaatccagcctttccccgtttacctccttcaagcttaccttcacaactgcct
gaaatggttacgggacataaagataatatgaactacgatgaatattacccttctcctgtc
ttttctcaatcaccctcactgtcaccaccaattcgcattcgtgtaaagcgcctgccaaat
ggtctattgcagtctgaaagtgctcctccaagtgcacctattgcaaagcttcctcattcc
cctgcattatcaagcaaaccgaatttgccaccatcccctccccttaaagcttctggagca
attatttctaggattaatagagatgttggtccattgccggctggctctgcaattggaaag
tcatcttctcttggacgagatgaaagccaaagaatttcaggctggagggtatcatccaat
aactcaccaatttcaagaagctctagtagatcttttccagatgacttagatgatccagag
tttccatgcccctttgatgtggatgaggatgagatgacagatagaggtagcaggcctgaa
tccttcgaccaaaaaggaaatctttgcgacatgctggaacccgggggattttttccgatc
cgtaaatctcaagatgctgctgttggtgctctagtacgtatgcttcaaaaagctccacca
cttcgccaagacttcaccaactccactgcagatcttggacaaccccctacacctgattct
ccaagcagaaatatccaacggggaaatcaaatatccgagtcattggctttaaagagtcgc
tatgctccctcctctagtatcgcagcctctggtctttttgtgcctaaaactacagctgat
gcactggaagaactacaaagctatagagagatgaaaaatttgttgataaggcaagctggg
aaaactcacacatga

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