Cucumis sativus (cucumber): 101221089
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Entry
101221089 CDS
T02486
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101221089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101221089
03029 Mitochondrial biogenesis [BR:
csv03029
]
101221089
Membrane trafficking [BR:
csv04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101221089
Atg1 complex
101221089
Mitochondrial biogenesis [BR:
csv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101221089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101221089
NCBI-ProteinID:
XP_004148643
LinkDB
All DBs
Position
6:complement(24429356..24437233)
Genome browser
AA seq
644 aa
AA seq
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MASSHNTHSETAKVEQILTEFFPKTLQIILESRAPCISSRNFSGEQVLSSPSSSSSSSSS
MRPRDKWFNLALRECSATLENIDLWRPNYHEPMVVDVILVQRQFGLDSVSASPRKDLVRN
LSLKEKYPLSFNSDKDEFGSQTKSEKVVERWMVHYESRKNRDSNSGSRRSSNSTAHTYKK
TILLLRSLYAFVRLLPAYKVFQDISSSGQIHPFTLAHRVSSFAEPFTRREEAEMQRFVFT
PVDTSCGRLCLSVLYRSSLSDINSEPSTPMSPQVIPEYVGSPLADPLKRFPTLPVTIAPS
HGSPSSLPFSRRHSWSYDRFRPSPPSVSFSPSPTHSESHALISNPAFPRLPPSSLPSQLP
EMVTGHKDNMNYDEYYPSPVFSQSPSLSPPIRIRVKRLPNGLLQSESAPPSAPIAKLPHS
PALSSKPNLPPSPPLKASGAIISRINRDVGPLPAGSAIGKSSSLGRDESQRISGWRVSSN
NSPISRSSSRSFPDDLDDPEFPCPFDVDEDEMTDRGSRPESFDQKGNLCDMLEPGGFFPI
RKSQDAAVGALVRMLQKAPPLRQDFTNSTADLGQPPTPDSPSRNIQRGNQISESLALKSR
YAPSSSIAASGLFVPKTTADALEELQSYREMKNLLIRQAGKTHT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcataatactcattccgagactgcaaaagttgagcaaattttaactgaa
ttctttcctaaaacgctacaaattatactggaatcgagggccccttgtatttcatcgcgt
aattttagtggcgaacaagttttgtcttctccatcttcttcctcctcgtcttcctcgagt
atgaggccgagggataaatggtttaatttggctcttcgtgaatgctctgcaacgttagag
aatattgatctctggcgtccgaattatcatgaacctatggttgttgatgttattttggtg
cagaggcaatttggtttagattctgttagtgcttctcctaggaaagatcttgttaggaat
ttgtctctgaaagagaaatatccactctctttcaattctgataaggatgagtttggaagt
cagaccaagagtgagaaagttgtagagcgatggatggtgcattatgagagtaggaaaaac
cgggatagtaattcgggtagcagaaggtccagtaatagtactgctcacacctacaagaaa
accattttactcttaaggtctttatatgcctttgtgagacttttacctgcctataaggtt
tttcaagatatcagttcatctggtcagattcacccttttactcttgctcatcgtgtgtct
tcctttgctgagcctttcacccggagggaagaggccgaaatgcagcgatttgtgttcact
cctgtcgacacttcttgtggtcgactatgcctctcagtgttataccgttcatccctctct
gacataaactctgaaccatcaactcctatgtctcctcaagttattcctgaatatgttggg
agtccattggcagatccattgaaaaggtttcctaccctccctgtaacgatagcaccatct
catggatctccatcgtcgttgccattctcaagacgtcatagttggagttatgaccgtttt
agaccttcccctccttcagtctccttttcaccttcaccaacacattcagagtctcatgct
ttaatttcaaatccagcctttccccgtttacctccttcaagcttaccttcacaactgcct
gaaatggttacgggacataaagataatatgaactacgatgaatattacccttctcctgtc
ttttctcaatcaccctcactgtcaccaccaattcgcattcgtgtaaagcgcctgccaaat
ggtctattgcagtctgaaagtgctcctccaagtgcacctattgcaaagcttcctcattcc
cctgcattatcaagcaaaccgaatttgccaccatcccctccccttaaagcttctggagca
attatttctaggattaatagagatgttggtccattgccggctggctctgcaattggaaag
tcatcttctcttggacgagatgaaagccaaagaatttcaggctggagggtatcatccaat
aactcaccaatttcaagaagctctagtagatcttttccagatgacttagatgatccagag
tttccatgcccctttgatgtggatgaggatgagatgacagatagaggtagcaggcctgaa
tccttcgaccaaaaaggaaatctttgcgacatgctggaacccgggggattttttccgatc
cgtaaatctcaagatgctgctgttggtgctctagtacgtatgcttcaaaaagctccacca
cttcgccaagacttcaccaactccactgcagatcttggacaaccccctacacctgattct
ccaagcagaaatatccaacggggaaatcaaatatccgagtcattggctttaaagagtcgc
tatgctccctcctctagtatcgcagcctctggtctttttgtgcctaaaactacagctgat
gcactggaagaactacaaagctatagagagatgaaaaatttgttgataaggcaagctggg
aaaactcacacatga
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