KEGG   Cucumis sativus (cucumber): 101221209
Entry
101221209         CDS       T02486                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csv03400]
    101221209
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    101221209
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 DEAD RING_XB3-XBAT31 Prok-RING_4 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 DEAD_2 zf-ANAPC11
Other DBs
NCBI-GeneID: 101221209
NCBI-ProteinID: XP_004139464
UniProt: A0A0A0LVN3
LinkDB
Position
1:complement(9988095..9996727)
AA seq 1040 aa
MGSKINDELVSTVRSIVGPDFSYMDVIRALHLAKNDATAAINIIYDTPSFGTRDKPRVQE
NSDVVHLPCVSSSESKAVTSTSKRVLDEGANFPSPEEETSTRSPCNVGVIKDVVVETSSP
CSSSIGSEWWLVGCAEVAGLSTSKGRKVKPGDGVVFTFPSRNGCKTPSPAKVFGKGRHMA
NFSEIVRFSSKDSGEIGRIPNEWARCLLPLVRDKKVRIEGSCKSAPEVLALMDTILLSIS
VYLNSSLLRKHQQTSLKAASSAAAESVIHPLPTLFRLLGLSSFKKAEFTPEDLSGRKRLL
DSKVSCSLPSSLARTLKNCSQNDNGSENEESISDIDLENIVGAGDTSELEEMDPPSALLC
DLRPYQKQALHWMIHLEKGKFMDEAATTLHPCWEGYRLADEREPVIYLNSFSGEATTEFP
STLQIARGGILADAMGLGKTIMTISLLLAHSERGGVSNGQLKHSSTEGDDGSIGESLNPL
KKAKITGFEKLLQQQRNTLASGGNLIICPMTLLGQWKAEIEAHVRPGYLSLHVHYGQTRS
KDARVLAQNDVVITTYGVLASEFSAENTEEGGLYSVRWFRVVLDEAHNIKSSKSQISIAA
TALVADRRWCLTGTPIQNNLEDIFSLLRFLRIEPWGNWAWWNKIIQKPFEEGDERGLKLV
QSILKPIMLRRTKCSKDREGRPILVLPPADVQVIYCGLTDAEKDFYEALFKRSKVKFDQF
VEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGTPNTQVGE
GRDLPSHAYVQEVMEELRSGEHGECPICLEVFEDAVLTPCAHRMCRECLLASWRNSSSGL
CPVCRKAINRQDLITAPTESRFQIDIEKNWVESSKVVALMNELETIRLSGSKSILFSQWT
AFLDLLQVPLSRSNIPFLRLDGTLSQQQREKVIKEFSEDNGILVLLMSLKAGGVGINLTA
ASNAFVLDPWWNPAVEEQAVMRIHRIGQTKSVKIKRFIVKGTVEERMEAVQARKQRLISG
ALTDQEVRSARIEELKMLFT
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgggaagcaagattaacgacgaacttgtgtccactgtacgctccattgtcggtcccgac
ttctcctatatggatgttattagagctctccacttggccaagaacgacgccaccgccgcc
attaatataatctacgatacccctagtttcggaacgagggataaaccacgagttcaggag
aattctgatgttgttcatcttccttgcgtttcgagttctgagagcaaggctgttacctct
acttcgaagagggttcttgatgaaggtgctaatttcccttcgcctgaagaggaaacgtct
actcggagtccgtgtaacgttggtgtcatcaaggatgtcgttgtggaaacctccagtcca
tgttcgagttcgattgggagtgagtggtggcttgttggctgtgctgaagtggctgggcta
tctacgtctaaggggaggaaggtgaagcctggagatggagtggtgttcacatttccttcg
aggaatgggtgtaaaacaccttcaccggctaaggttttcgggaagggaagacacatggcc
aatttttcggagattgtgaggttttcttcaaaagactctggggagatcggtcgaataccc
aatgaatgggctcgatgccttctaccattggtgagggataaaaaggttagaatagagggt
tcgtgtaaatctgcaccagaagtgctggctttaatggatacgattcttttatctataagt
gtataccttaacagttctttgcttcgtaagcaccaacagacctcccttaaagcagctagc
agtgcagctgcagaatcagttattcatcctctcccaactttgtttcggcttcttggttta
tcatctttcaagaaggctgagtttactccagaggacttgagtggaagaaaacggctgctg
gactcaaaggttagttgtagtctgccgtcctcattagcacgtaccttgaagaattgttct
caaaatgataatgggtctgaaaatgaagagtcaatctcagatattgatctggagaatatt
gttggtgctggggatacttcggagctggaggaaatggatccacctagtgccctgctatgt
gatcttcggccgtaccaaaagcaagctcttcattggatgatccatttggagaaaggaaag
ttcatggatgaggctgcaacaacccttcatccatgttgggaaggttatcgtcttgcagac
gagagggaacctgtcatctatttaaattctttttctggtgaggctacgacagagttccca
agcactctccaaatagccagaggagggattctggctgatgccatgggcctcgggaagacc
atcatgaccatatcacttcttcttgctcattcagaaagaggtggagtatccaatggtcag
ctgaaacattcctccactgaaggtgatgatggaagtattggtgaatctttgaatcctttg
aagaaggctaaaattacaggttttgaaaagttgctgcagcagcagaggaacaccttagca
agcggtggcaatctgataatttgtcccatgacccttttgggacagtggaaggcagaaatt
gaagctcatgtgcgacctggatatctgtctctacatgtacattatggacagactagatcc
aaggatgctagagttttggcacaaaatgatgttgtaatcactacctatggggttttagcc
tctgaattttctgcagagaacactgaagaaggtggactttattcggtaaggtggttcaga
gttgttcttgacgaggctcacaatattaagtcctctaaaagccaaatttccattgctgct
actgcgctagttgctgatcgtcgctggtgtcttactggtactcctatccagaacaacctg
gaggatatcttcagtcttcttcgattcttgcggattgaaccttggggaaattgggcatgg
tggaataaaatcattcaaaaaccatttgaagaaggtgatgagagagggctaaaattggtt
caatccatcttaaagccaatcatgctgaggaggactaaatgtagtaaagatcgagaaggc
aggccaattttagttcttcctccagctgatgttcaggtgatttactgtggacttacagat
gctgaaaaagatttctatgaggcacttttcaagagatccaaggtgaaatttgaccaattt
gttgagcaagggcgtgtccttcacaattatgcatcaatattggagttacttttacgtctt
cgccaatgttgcgatcatccctttcttgtgatgagtcgaggtgatacccaagaatattct
gatctaaataaactagcaaaacgttttcttaaaggcactccaaacacacaggtaggagaa
ggaagagatctgccttctcatgcttatgtccaagaagttatggaagagcttcgcagtggc
gaacatggagaatgtccaatatgtctcgaggtatttgaagatgcagtattgacaccatgt
gctcatcgtatgtgccgagagtgccttttggcgagttggagaaactctagttctggttta
tgtccagtatgcaggaaagcgatcaatagacaggatcttataactgctccaactgagagt
cgtttccagattgatattgagaaaaattgggtcgaatcatccaaagttgtggctctgatg
aatgaacttgaaactattcgtttgtcagggtcaaaaagtattttattcagccagtggact
gcctttcttgatcttttacaagttcctctctctcggagtaatattccttttctccgtttg
gatgggactttaagtcaacaacagagggaaaaagttataaaagagttttcggaggataat
ggaattctggtgttgttgatgtcactcaaggctggtggagttggaataaatttgacagct
gcttcaaatgccttcgtattggacccatggtggaatccagcagttgaagaacaagcagtt
atgcgcattcatcgcatcgggcaaactaagagtgtaaaaataaaacgctttatcgtaaag
ggtactgtggaggaaaggatggaggcagtacaagcaagaaaacaacgattaatttctggt
gctttaacagatcaagaagtccgaagtgcacgaattgaagaattgaagatgctttttact
tga

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