Cucumis sativus (cucumber): 101221401
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Entry
101221401 CDS
T02486
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csv04812
]
101221401
Cytoskeleton proteins [BR:
csv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
101221401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
eIF2A
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_ACSF4
VPS8_N
Csm6_6H
Motif
Other DBs
NCBI-GeneID:
101221401
NCBI-ProteinID:
XP_011655511
UniProt:
A0A0A0KPN4
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Position
5:complement(24281231..24290557)
Genome browser
AA seq
844 aa
AA seq
DB search
MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR
TEPYAVNNANRLNGRPEPKSSSHLQNENNTKTSFGGLSVSQTSDALLKETKTLGRLSVSQ
NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVSSAAVPSAVVPKRNSVKATSTFNNP
IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAVPVSRTNSRQEQDDSRKEFDVAARVM
PLSRSNSRHEQDDSRKECDVAGRAAPAPLLSKTTDNRRFPNSRDEVDNPTISVLSESRGL
KANDMSTIADNRNSLHGIGSIQGVSAPQKIVKEERYIGSGKNETETKDTTANYKHEDESR
GHKISRDASFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRGYR
PSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHDIKGAVSAMEKM
ADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLDISMEMLVKLVRTFGS
VIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNLAL
QEFQ
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaaacgggcgtacaagctacaagaatttgtggcacattcttccgctgtcaat
tgcctgaagattggaaggaagtcatcccgcgttcttgtcacaggaggggaagacttcaaa
gtcaatctctgggctattggtaaacccaatgccatactgagtttgactggccatacgagc
ggaatagattctgtaagctttgactcatcagaagtgttggtagctgcaggggctgctagt
ggcacgatcaagctttgggatttggaggaggccaaaattgttcgaacgcttactggtcat
agatccaattgcatttctgtggattttcatcccttcggggaattctttgcttctgggtcc
ttggatacaaatcttaagatatgggacatcaggaagaaagggtgtatccacacatacaaa
ggtcacactcgaggagtcaatgcaatcagatttactccagatggccgctgggttgtatct
ggtggagaagacaacacagtgaagctctgggatttaactgctggaaagctgttgcatgat
tttaagtgccacgagggtcaggttcaatgtatagactttcaccctcatgaatttttgcta
gcaacaggttcagcagataaaacagttaaattttgggacctggaaacctttgagttgatt
ggttcagctggacctgagaccagtggagtccgttgtttaacatttaatcccgatgggagg
acattgctttgcggattgcatgaaagtttgaaggttttctcatgggaaccgataagatgt
catgacggtgtggaagttggttggtctaggctgtctgatcttaatgttcatgaggggaaa
cttcttggttgttcgtacaatcagagctgtgttggagtgtgggttgtagatattacgcgg
acagagccgtatgcagttaacaatgctaacagactaaatggtcgaccagaacctaaatcc
agcagtcatctacaaaatgagaacaacaccaagactagttttggtggattgtcggtatca
caaacttctgatgcactattgaaggaaaccaaaacattgggaagattgtcagtttctcaa
aattcagacgttgccaaggatccaaaatctttgtcgtccacaggaaatggaccaagtact
cctcaaaagatcaatttaaatgctggctcaaaaactaatttggttagctcagcagcagta
cctagtgcagtggtgccgaagagaaactctgtgaaggctacttcaacattcaacaatccc
atcttcaataagtcagatgtgatacctgtaatcgtacccaggacaagttcaaggcatgag
caggatgattctagaaaggagtttgatgttgctggaagagcagtccctgtatcaaggaca
aattcaaggcaagagcaggatgattctagaaaagaatttgatgttgctgcaagagtaatg
ccactgtccaggtcaaattcaaggcacgagcaggatgattcaagaaaggaatgcgacgtt
gctggaagagcagctccagcaccattgctatccaaaactactgataacaggaggtttcca
aatagtagagacgaagttgataatccaactatctctgtgctttctgaatccagaggtttg
aaggcaaatgacatgagcaccattgcagataataggaattccttgcatggcattggttca
attcaaggagtatctgctccacagaagattgtgaaagaagaaagatatattggatctggc
aagaatgaaacagaaacaaaagatacaacagcaaactacaagcacgaagatgaatcaaga
ggccataaaataagcagggatgcatcttttcctgaagctacaaaaggagggagattgcgt
tcacatgtggattgggagaaaagagagagacctaattttagccggctaacgtataatgcc
tcccctggaagagcagctgcacttgaaaatattccattaaataacgggagaggatatcgt
ccatctcctgagaaagaaacagtatcacctgcaagtgatgaggataccatagcaaatgtt
ctacaacaacacgaccaatttgtcaactcgatgcaatctcggtcggcaaaattgcaagca
gtctatagacattgggaaagacatgacattaaaggagcggtttctgcaatggagaaaatg
gctgatcatgcagttgctgccgatgtaattagtattatgaccaatagaattgaagttgtc
accttagacatctgcacttgtattcttccagttctctctggcctccttgaaagtgacttg
gataggtatttagacatttctatggaaatgctagtgaagctggtgaggacgttcggttca
gtgatctattcaacattgtcggcgacatcatctgtgggtgtaaacatagaagcagagcaa
aggttggagcgatgtaatctatgcttcatcgagcttgaaaaagttaagcgctgcctgcca
gcccttataagaaaaaggggatcggtagcaaagtcagcacaggagttgaatcttgctctt
caggaatttcaatga
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