Cucumis sativus (cucumber): 101221461 Help Entry 101221461         CDS       T02486                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism csv  Cucumis sativus (cucumber) Pathway csv03013   Nucleocytoplasmic transport csv03040   Spliceosome Brite KEGG Orthology (KO) [BR:csv00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101221461   09122 Translation    03013 Nucleocytoplasmic transport     101221461  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csv03019]     101221461    03041 Spliceosome [BR:csv03041]     101221461 Messenger RNA biogenesis [BR:csv03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      101221461 Spliceosome [BR:csv03041]  Complex C   Other components    EJC/TREX     101221461  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     101221461 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 LIM_bind Motif Other DBs NCBI-GeneID:  101221461 NCBI-ProteinID:  XP_004142861 UniProt:  A0A0A0KPA6 LinkDB All DBs Position 5:23063993..23088575 Genome browser AA seq 1887 aa AA seqDB search MALPPVECMYVVESNIREWKSGNSSFRVPQPVPVVRFLYELCWTMVRGDLPFQKCKAALD SVEFSEKMSAEELGSTFADVITQLAQDITLAGEYRARLLKLAKWLVESAFVPLRLFQERC EEEFLWEAEMIKIKAQELKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRVTDAS NKSFPGSTIGIIKSLIGHFDLDPNRVFDIVLECFELQPENSVFVELIPIFPKSHASQILG FKFQYYQRIEVNSPVPFGLYKLTALLVKEKFIDLDSIYAHLLPKEDEAFEHYGSFSSKRL DEASRIGKINLAATGKDLMDDEKQGDVSIDLFAAIDMESEAVNERSPELENNQTLGLLTG FLSVGDWYHAHVLFDRLSPLNPVELLPICNSLFRLIEESISSAYSIVRQNPHQSLGASAG SSIDAIETTNLPVGGSFIGLPRELFQMLATAGPYLYRDTILLQKVCRVLRGYYTSAIEFV NSVESGQNPELVMPAGNRVPHLHLKEARLRIEEALGTCLLPSLQLIPANPAVGQGIWEVM NLLPYEVRYRLYGEWERDDEKIPMVLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAH ANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGRDKLKDDGL NLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELVQQMANVQYT ENLTEEQLDSMAGSETLRYQATSFGVTRNNKALIKSSNRLRDSLLPKDEPKLAVPLLLLI AQHRSLVVINANAPYIKMVSEQFDRCHGTLLQYVEFLTTAVTPASAYAQLIPSLNELAHL YHLDPEVAFLIYRPIMRLYKCQGGSDIFWPLDGNDANVIGNSSDLEPAECSADVVLDLGS LQKPVRWSDLLDTVKSMLPPKAWNSLSPDLYTTFWGLTLYDLYVPRSRYESEIAKQHAAL KALEELSDNSSSAINKRKKDKERIQESLDRLSNELVKHEENVASVRRRLSREKDKWLSSC PDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQP MICCCTEYEAGRLGRFLYETLKIAYHWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQ FIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISNVFPVTRKSGINLEKRVAKIK SDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKTPSLASKPSASNLASSQNNSI FVSQNEPVGGKTSALPIPNSDSGNMAKDHSLRSRTSDVRTDKIDGLSVPKSELGHGKQKG MSLNGPDSQPLVPSTSVHSGSLKMVDSQKPGDDSTRTLDEGSSKVVSKTSSESELRGSTK RSGPVTSLNKAPKQDITKDEIRSGKAASKNPGSSTSERELPVHATDGGRHGGPSNSPSIM SNGNTQNSLTKGSSLTVKASDGHTIESKAESGVGRTSDGRVSSVKDDGPEALDVSRSSSS RLGHSPRHDNSASGSRSSDKLQKRASPAEEPDRQGKRRKGDGEIRDVDGDFRISDKDRSM DPRSIDADKIGMEEQSGYRGLDKPLDRTKDKVNERYDRDYRDRAERPEKSRGDDPQVERT RDRSIERYGRERSVEKVERVSDRYPEKSKDERNKDDRSKLRYSDSTVDKSHTDDRFHGQS LPPPPPLPPHLVPQSVNSGRREEDADRRFGTARHAQRLSPRHEEKERRRSEENLISQDDA KRRREEEFRERKREERDVGMSLKVDDREREREKANLLKEDMDASAASKRRKLKREHLSLV EAGEYSPVGPPPPPMGGGVSQSYDGRERGDRKGVMMQRPGYLDDPGLRIHGKEVVNKMTR READLMYEREWDDEKRMRADQKRRHRK NT seq 5664 nt NT seq  +upstreamnt  +downstreamnt atggctctcccgcccgtagagtgtatgtatgtcgtagaaagcaatattcgagaatggaag tccggaaactccagctttagggttcctcaacctgtccccgtggttcgcttcctttacgag ctctgctggaccatggttcgaggggatttgccatttcagaagtgtaaagcagcattggat tcagttgagttctcggagaaaatgtctgcggaggagttaggatcaacttttgctgatgtt attacccaattggctcaagatatcacattagcgggagagtatcgtgctcggcttttaaaa ttggctaagtggctggttgaatctgcatttgtcccattgaggctttttcaggagcgatgt gaggaagaatttctatgggaggctgaaatgataaaaattaaggcgcaggaattaaagagt aaagaggttagagtaaatactcgtcttttatatcagcaaacaaagtttaatcttctgcgg gaggaaagcgagggctatgccaaattggtaacacttctttgccgggtcaccgatgcttca aataaaagctttccaggttccacaattggtattataaagtcattgattgggcactttgat ctggatccaaaccgtgtttttgacattgtcttggagtgttttgaactgcagccagaaaat agtgtttttgtggagctaataccaatatttcctaagtcccatgcttcacaaatccttggg ttcaaatttcagtattatcagcgcattgaagtaaattcgccagttccatttggactttat aagcttacagcgttactagtgaaggaaaagtttattgatcttgatagcatatatgcacat ctacttcccaaggaggatgaggcatttgagcattatggttccttttcttccaaacgactt gatgaggctagcagaataggtaaaataaatcttgcggcaactggaaaggacctaatggat gatgaaaagcaaggagatgtaagcattgatctttttgctgctattgacatggaaagtgag gcagtcaatgaaaggtctccagaactagaaaataatcaaacactgggcttgcttactgga tttctttctgtgggtgactggtatcatgcacatgtactgtttgatcgtctatcgcctctc aatccagtggaacttcttccaatttgtaacagcttgtttaggctcattgaagaatcaatc tcctctgcatactctattgttcgtcagaaccctcatcagagcttgggggcttctgcagga agcagcattgatgctattgagactacaaatttgccagttggtggttcttttataggtctt ccaagagaacttttccagatgcttgccactgctggaccttatctctatcgtgatacaatt ctgctacagaaggtttgcagggtgctgagaggttattatacatcggcaattgaatttgtc aacagtgtggaaagtggtcaaaatcctgaacttgtaatgccagctggaaaccgagttcct catcttcacttgaaggaagctaggctgaggattgaggaagccttaggaacatgcctactt ccttctttacagttgatacctgccaatccagctgttggtcaagggatatgggaagtaatg aatcttcttccgtatgaggtgcgatatcgtttatatggtgaatgggagagagatgacgag aagattccaatggttttggctgcaaggcaaacggcaaagttggatacacggaggattttg aagcggttggctaaggagaacttgaagcaattgggtaggatggttgcaaaacttgcgcat gctaatccgatgactgtccttcggacaatagttcaccagattgaggcatatagggatatg attactcctgtagtagacgcattcaagtatctgactcagcttgagtatgacatattggaa tatgttgtgattgaacgtttggcgcaaggagggcgtgataagttgaaggatgatggcctt aatctctcagattggctccaatcattagcttcattttggggtcacctgtgtaagaagtat ccatctatggaactaaggggtttatttcagtatctcgtcaatcagttgaaaaaaggtcaa ggaattgagcttgttctcctgcaggaacttgtccaacaaatggctaatgtccagtacaca gaaaacctaactgaggaacagttggattctatggcaggaagtgagacgcttcgttatcaa gcaacttctttcggagttactcgaaataacaaggcattgatcaagtcgagcaacagactg cgtgactcattacttcccaaggatgaaccaaaattggcggtccctcttttgctacttatt gctcaacatcgttcattggttgttataaatgcaaatgctccttatataaagatggtcagt gagcagtttgatagatgtcatggaactctccttcaatatgtggaatttcttacaactgca gttacgcctgcttcagcttatgctcagttgattccctcactcaatgagcttgcccatctt tatcaccttgatcctgaggttgctttcctgatttatcggccaataatgaggctatataag tgtcaaggtggttctgatatcttctggccactggatggaaatgatgcaaatgttataggc aacagttctgatctggaacctgcagaatgttctgctgatgtcgttttggatcttggttct ttacagaaacctgtgaggtggtcagatctgcttgatactgtgaagtctatgttacctcca aaagcttggaatagcttgtctccagatctctatactacattttggggtctcactctctat gatctttacgttcctcgaagtagatatgaatctgaaattgctaagcagcatgctgctctt aaagctttagaagagctatctgataactctagttctgcaatcaacaaaaggaagaaagac aaagaaagaattcaagaatctctggatcgcttgtccaatgaacttgttaagcatgaagaa aatgttgcatctgttcgtagacgactttctcgtgaaaaggataagtggttgagctcctgt cctgatactctgaaaattaacatggagttccttcagcgttgtatttttccccgctgtaca ttcagtatgcctgatgcggtctactgtgctatgtttgtgcacactcttcattcccttgga acgccatttttcaatacagtcaaccatattgatgttttgatatgtaaaactttgcaaccc atgatatgctgctgtacggaatatgaagcaggcaggcttggaaggttcttatatgagaca ctaaagatagcttatcattggaagagtgatgaatccatttatgaacgtgaatgtggaaat atgcctggattcgctgtctactataggtatccaaatagtcaaagagtaacgtacggccag ttcatcaaggttcattggaagtggagtcaaagaattacacggttactgatacaatgcttg gaatctacagaatacatggaaattagaaatgctcttataatgttaacaaaaatttccaat gtgtttcccgttactagaaagagtggaatcaaccttgagaaacgggtagccaagatcaaa agtgatgaaagagaagatctgaaggttttagctactggtgttgctgcagccttggctgct agaaagccttcatgggttacggatgaagaatttggcatgggttaccttgaattgaagaca ccatctcttgcgtcaaaaccttcggctagtaatttagcttctagccaaaataattccatt tttgtttcacaaaatgaacctgttggagggaagaccagtgcgctacccatcccaaattca gattctggaaatatggccaaagatcattcattgaggtcaagaacttctgatgtgagaacg gacaaaatagatgggctctctgttccaaaatctgagctcgggcatgggaagcagaaaggg atgtcattgaacgggccagattcccagccactggtaccctcaacttctgtgcattcggga tcattaaaaatggtggatagtcagaaaccaggtgatgactcaactaggactttggatgag ggctcatcaaaagttgtttcaaagacctcttctgaatcggagttgagaggttcaaccaaa cgatcagggcctgttacatctcttaataaagcaccgaaacaagatatcacaaaagatgaa attagatcgggaaaagcggctagcaagaatcctgggtcttcaacgagtgaaagggagctt ccagttcatgcaacagatggtggtaggcatggaggtccttctaattcaccttccattatg tcaaacggtaatacacaaaattctttaactaaaggctcctccttaacagtaaaagcttca gatggtcacactattgaatcgaaggcagagagtggggttggaaggacatctgatggtagg gtgtcttcggtgaaggatgatggccctgaagctcttgatgtttcgagatcctcttcttcc agacttggtcattctcctaggcatgataattctgccagtggttctagatctagtgataag ctgcagaaaagagctagtcctgcagaagaaccagacaggcaaggcaaacgccggaaggga gatggtgagattagggatgtagatggggattttcgtatctctgacaaagatagatccatg gacccacgatctatagatgccgataaaataggaatggaggaacaaagtggttacagaggt ttagacaaacctttggatagaacaaaagataaagtaaatgaaaggtatgatagggactac agagaccgggctgaacgtcctgaaaagtcccgtggagatgatcctcaagtagaaagaaca agagacagatcaatagaaagatatggaagagagcgctcagttgagaaagtggagagagtt tctgataggtatcctgaaaagtctaaggatgagagaaacaaagatgataggagcaaatta cgatatagcgattcaactgtagacaagtctcacactgatgatcggttccacggacagagc ttgccacctccaccacccttgccgccacacctggtccctcaatctgttaatagtggaaga agagaagaagatgcagataggaggtttggaactgctagacatgctcaaaggctttctcct agacatgaagagaaggaacgaagacgatcagaggaaaatttaatttcacaggatgatgca aagcgcagaagagaagaggaatttcgagaaagaaagagagaagagagagacgttgggatg tcgttgaaggttgatgacagggagagggagagggaaaaggcaaaccttttgaaagaggac atggatgcttcagctgcctctaagaggcgaaaacttaaaagggagcatctgtcattagtt gaggctggtgagtattctcctgttggcccaccaccacctccgatgggtggtggtgtgtct caatcttatgatggacgagaaagaggagaccggaagggagtaatgatgcaacgtcctggt tacctagatgacccaggcttgagaatccacggtaaagaagtggtgaacaagatgacaaga cgtgaagctgatctaatgtatgaacgagaatgggatgacgagaagagaatgagagcagat cagaagagaaggcatcggaaataa

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