Cucumis sativus (cucumber): 101221903
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Entry
101221903 CDS
T02486
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101221903
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101221903
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101221903
NCBI-ProteinID:
XP_031741281
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Position
5:complement(6977084..6979278)
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AA seq
453 aa
AA seq
DB search
MTRNLSLIQIILLEFAWQSCAVIFNDITGTQNLLKGIVPTTNKQFLRPAEAPRHLGFNTL
PDIGGTVNDINANVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKF
LIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSPEWFSIEDITGFILTGSG
VFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFT
ATNMKIIAPHNSPNTDGTHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGH
GLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASRISGLASRIIFEDIVMYNVK
NPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLS
YGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaatcttagcctcattcaaatcattctcttagaatttgcttggcaatcctgt
gctgtcattttcaatgacatcaccggcactcaaaatcttctcaaggggatcgtaccaaca
acaaataagcagtttcttcgtcctgcagaagcacctcggcatcttggctttaatactctt
cccgatattggcggcacggtgaatgacattaacgcaaatgttgatctaaatgagaatggt
gggtcagtttttgatgttacaaaacatggagctaaagctgatggaaagactgatgatgca
caagcattcatgacaacatggattgcagcttgtcggaacacagtcggtccggcgaagttc
ttgatcccacaaggcacatttctagtggggccggtgactttcgctggtccgtgcaaaagt
tatccgatcaccctcgaaaatcaaggaactgtaaaggccacgaccgatattagtgcatat
tcatctccagaatggttctccattgaagatattactggtttcatcctcaccggctccggc
gtctttgatggccaaggcctctcagtttggccctacaacgactgcaagaaaaacaactta
tgccaacttcttccaatctcgattaaatttacgagattaaatcacacgattgttgatggc
ctcacttcgataaatagcatggggtttcacacttctgtattctattgctacaatttcact
gctactaacatgaaaattatagctccacataatagtcccaacaccgatggaacgcatctt
agcacctcaaaattggtcaccattgccaacagtgtcattggcaccggtgatgattgtgtc
tccattggccatagtactgaaaatatcaccgtcaccaatgtcacttgcggccctggacat
ggccttagtgtgggcagcttgggcaagtactcgaaagaaaagggtgtctacgacgttcta
gtaaagaactgcaccattttcaatgccaccaatggtgccagaatcaagacatgggctagc
cgtatctcggggttagcctcgagaattatctttgaagacattgtaatgtacaacgtaaaa
aatcctataattatcgatcaaacctacagcactaaaaagaagaaggaatcaaattggaag
gttagcaatgtacagttcaagaacattcggggaacatcgacaacgaatgtggcagtgttg
ttggagtgtagcaagttgtttccatgcgaaggggtggagttgagggacattaacttgagt
tatggaggcaccaacttgagaaatacgaccattgtttcttcatgttcaaatgcaaagatt
gctacttttggggttcaaaagccaccaccttgtgttgtataa
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