Cucumis sativus (cucumber): 101221953
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Entry
101221953 CDS
T02486
Name
(RefSeq) THO complex subunit 4A isoform X1
KO
K12881
THO complex subunit 4
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
csv03015
mRNA surveillance pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101221953
09122 Translation
03013 Nucleocytoplasmic transport
101221953
03015 mRNA surveillance pathway
101221953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101221953
03041 Spliceosome [BR:
csv03041
]
101221953
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101221953
TREX complex
101221953
Spliceosome [BR:
csv03041
]
Complex C
Other components
EJC/TREX
101221953
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101221953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Kdo_hydroxy
Motif
Other DBs
NCBI-GeneID:
101221953
NCBI-ProteinID:
XP_004149042
UniProt:
A0A0A0LUQ3
LinkDB
All DBs
Position
1:20698963..20702124
Genome browser
AA seq
250 aa
AA seq
DB search
MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSKAPETA
WSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINY
DKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFG
NPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGSGRGHGEKLSAEDLDADLD
KYHEEAMQIN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcctctcgacatgagcttagatgatatcatcaagaacaacaagaaatccggc
tcctcaaacttcagagctcgtggcggagcttcttctggaccaggtccttctcgccgcttt
cgcaatcgtggtcttaatagagcaacgccttattctacttccaaggcgcccgagacggct
tggtcacacgacatgtttgtagatcacggtgcggcttatccttcacatcctccacgggct
tctgctattgaaactggcaccaagctttatgtttctaatttggattatggtgtctccaat
gaagatatcaaggagctgttttctgaagttggtgatgtcaaacggtattctatcaattat
gataaaagtgggagatcgaagggaacagcagagattgttttttcacgacaagcagatgct
cttgctgctataaagagatataacaatgttcagctggatgggaagcccatgaagttggag
attgttggcactaacatcgttacacctgctgtgcctgctccttcaaatgctagttttggg
aatcctaatggatttccgagaggtggacgtgcaatgggtcgaaaccgaggtggtggacga
gggcgtggtcctggaagagggcgtgggcgtggacgtgggagtgggagtgggagtgggagt
gggagtggcagaggtcatggtgagaagttatcagccgaagatctagatgcggatttggac
aagtaccatgaagaagcgatgcagatcaattaa
DBGET
integrated database retrieval system
