Cucumis sativus (cucumber): 101222376
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Entry
101222376 CDS
T02486
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101222376
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csv01009
]
101222376
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101222376
03036 Chromosome and associated proteins [BR:
csv03036
]
101222376
Protein phosphatases and associated proteins [BR:
csv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101222376
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101222376
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101222376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
Adaptin_N
TOR1L1_N
Cnd1
TAF6_C
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
101222376
NCBI-ProteinID:
XP_011655767
LinkDB
All DBs
Position
5:complement(27201365..27208213)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPEMLKTELRSIYGQLCQDDMPMVR
RSAATNLGKFAATIEPAHLKTDIMTIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVL
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDMINNPHYLYRMTVLRAVSLLAPVMGSEITCTKLLPVVISSSKDRVPNIKFNVAKVLQS
LIPIVDQPVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgacgagccgctttatccaatagctgttcttattgacgagctgaagaat
gacgacattcagctacggttgaactccattcggagactttccacaattgcacgtgctctt
ggagaggagcgaacccgtaaagagttgatcccatttctgagtgaaaacaatgatgacgac
gatgaagtacttcttgcaatggctgaggagttgggggtgttcatcccgtatgtaggtgga
gttgagcatgcccatgttttgcttccacctctagaaactctgtgcactgttgaggagaca
tgcgtgagagacaaagctgtggagtcattgtgcagaattggatcccagatgagagagagt
gatttagttgattggttcattcctctcgttaagagattggcagctggtgaatggtttaca
gctagagtatctgcatgtgggctatttcatattgcctaccccagtgctccagagatgttg
aagactgagttgcggtcaatttatggccaattgtgtcaagatgacatgcccatggttagg
aggtctgctgcaacaaacctaggaaaatttgctgccacaatcgaacctgctcatctgaaa
actgatattatgacgatatttgaggatcttacacaagatgatcaagattctgtaagattg
ttggctgttgagggttgtgctgctttgggcaagttattggaacctcaagattgtgttttg
catatccttccagttattgtaaacttctctcaggataagtcttggcgtgtgcgttacatg
gttgcaaaccagctatacgaattgtgtgaagctgtaggacctgaaccaactaggacggat
ttggtacccgcttatgtacgcttgcttcgagacaatgaagctgaagttcgtattgcagcg
gctggcaaagtgaccaagttctgccggattttaagtccagaactggcaattcaacatatt
cttccctgcgtgaaggaattgtcatcagattcctctcagcatgtccgttcagctttagcc
tcagttatcatgggaatggctcctgtgttgggaaaggacgctaccattgaacagctcctc
ccaatattcctttctctgcttaaggatgaatttcctgatgtgcgccttaacatcatcagc
aagcttgatcaagtaaatcaggttattggaattgatctcttgtctcaatcgctgttacct
gccatagttgaacttgctgaggataggcattggagggttaggttagcaatcatagagtac
attcctttactggcaagtcagctgggtgtagggttttttgatgataagctcggcgctctt
tgcatgcagtggttacaggataaggtttactcaatccgtgatgcagctgctaataatttg
aagcgacttgctgaagagtttggtcctgagtgggcaatgcagcatattgtcccacaggtt
cttgacatgattaacaacccacattatttgtatcgaatgactgttcttcgtgcggtctcc
cttcttgccccagttatgggctcagaaatcacatgcacaaagcttttacctgtagttatc
agttcttccaaggacagggttccaaatatcaagtttaatgtggcaaaggtgttgcagtcc
ctcattcccatagtcgaccaacctgtggtggagaaaacaatccgtcctagtctagttgaa
ctcagtgaggatccagatgtagatgtccggttctttgccaaccaagctcttcaatcaatc
gatcacgtgatgatgtctagttaa
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integrated database retrieval system
