Cucumis sativus (cucumber): 101222391
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Entry
101222391 CDS
T02486
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101222391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101222391
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101222391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
MsrA_helical
Motif
Other DBs
NCBI-GeneID:
101222391
NCBI-ProteinID:
XP_004140014
UniProt:
A0A0A0KDX2
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All DBs
Position
6:complement(7542753..7547322)
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AA seq
476 aa
AA seq
DB search
MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS
VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG
GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ
GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA
GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatagtggcaaattatttgttggtggaatatcttgggatactgatgaagac
cgtcttaaagagtatttcaatgcatatggtgatgttgtagaagctgtcattatgaaggat
cggaccacaggtcgtggtcgaggctttggcttcattgtttttgctgatccaagtgttgca
gatagagttataagggagaagcataatattgatggaagaatggttgaggctaaaagggct
gttcctaggaatgatcagaacattgtaggtagaaccagtggtagcattaatgtttctcct
ggtcctggacgaactcgaaagatatttgttggggggttagcatctactgttacagaaagt
gaattcaagaattattttgatcaattcgggacaattacagatgttgtggtgatgtacgac
cacaatactcttcgacccagaggatttgggtttattacatatgattctgaagaagcagta
gagaaagttcttatcaagactttccatgaattgaatggcaaaatggttgaagtcaagcgg
gcagttccgaaagagttgtcaccaggccccagccgtagtccacttggtggatacaattat
ggtcagagtagggttaatagcttccttaatggttacactcagggttacagttcaagtaca
attggaggctatggtgttagagtggatggtagatttagtccagtttccagtggtcgaagt
gtattcaccccatttggttcaggttatggaatgggtgtgaactttgatattggcttaaac
ccagggtatgggggaaattctaatttcgccagtaatctcaactatggacggggactgagc
ccttattatactggtaactcagatagatttggcaatatagggtatgaaagtggcaatgga
ggaaactcgtccttcttcagctcagaaactcaaaacttgtggggaagtggagggctcaac
aatggaacaaactctgccaattccaatgctcatttgggatcagcaactggtggcagcgtt
gggggaactggatttgccaattctggagttagctggggtagttcgggaatctcgtctcaa
ggtggaggaaacaatgtttttagtaactctgggaatcttaattatggaggtgttgatagt
agttatagtctaggagctggagggtatgggagaaacagtggtactgttttgcctccaaca
tcatcatttcctacctcaactgtcggttttgacggtccctttgctgatttctacagtgcc
ggttatggtgatcccacgtggcgttcttccaactttgaaagagatggatctggacccttt
ggttatgggctcggcagtgctgcttcggatgtctcagccagaagctctcctggttttatt
ggtggtcatagtgttaataggaggcagtcaaacagaggaaacactacctag
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