Cucumis sativus (cucumber): 101222392
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Entry
101222392 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101222392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101222392
03036 Chromosome and associated proteins [BR:
csv03036
]
101222392
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101222392
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101222392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
101222392
NCBI-ProteinID:
XP_004140177
LinkDB
All DBs
Position
6:22145691..22153546
Genome browser
AA seq
1073 aa
AA seq
DB search
MASSSCLPLVSENFSEDHDGKSYLPPFMSSRPDLDAMTSEDQATLQHKRRKIASDAGFSS
HDHLKEHKNSFPTLQSPDYYISPSLEEMSIHVLKDPNYTSQVLDFTIGRCGYGSVKFFGK
TDVRCLDLDQIVKFHKNEVIVYEDETTKPIVGQGLNKPAEVTLVLQSITTSFLGRQFDNV
VKKLKYFTERQGAHFISFEPENCEWKFSVNHFSRFGLTEDEEEDVVMDDPNAVQEPAEIN
CNEISENNENSPMDFTESVLCHSLPAHLGLDPVKMKEMRMVIFPENEQEFEDYNESPKFQ
KSFTGREYMRTTPFKDSSQRTNQKLNSLVVRKTPLALLEYNQGSLDSNSPGSILMSQPKK
VTPVKRSKAEGFKLDLTHETPITLDHSRNIVDAGLFMGRSFRVGWGPNGILVHTGNLVGS
KNSQRVLSSIINVEKVAIDNVVRDENRKMRKELVEYAFDLPLSLHKEMNHEFEEEVGSFN
LKLQKVVFNRLMLSDICRSYIDIVERQLEVPGLSSSARLVLTHQIMVWELIKVLFSEREN
VGNSLDSDNEEDMMQEQDIKEDSPEFDLEALPLIRRAEFSCWLQESVFPQVQYELGSLKD
SSYLEHIFLLMTGRQLDAAVQLASSKGDVRLACLLSQAGGFTVGSTVKRNDVALQLDIWR
RNGLDFNFIEKERTQVYELLAGNIFDALHDFDLDWKRFLGLLMWYRLPPDTTLPVIFHSY
QHLLKSGRAPLPVPVYADGPQELVLKSNTNECLDLSYFLMLLHANEDPEFGFLKTMFSAF
SSTDDPLDYHMIWHQRAVLEAIGAISSKDLHILDMGFVSQLLCLGQCHWAIYVVLHMPFR
DDFPHLQAKVIKEILFQYCEIWSSQESQFEFIENLGVPRIWLHEAMAVFFSYLGNLPEAL
EHFIECRNWHKAHTIFTTSVAHKLFLSAEHSDIWKFATSMEMHKSEIENWEFGAGIYISF
YSLRSSLQENTEGSELDSLESRNAACGEFLGRLNESLAVWGDRLPVQARVVYSKMAEEIS
RLLLSDIGEGSTRDAQLSCFDTIFSAPMREDLRSSHLQDAVSLFTCYLSEITS
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcctcttgtcttcctttggtttctgagaatttcagtgaagatcacgatgga
aaaagctacctaccaccctttatgagttcgaggccggatcttgatgctatgacctctgaa
gatcaagctactttacaacacaagagaagaaaaattgcctctgatgctggtttttcatct
cacgatcatttgaaggagcacaaaaattcctttccgacattgcagtctcctgattattat
atttctccaagcttggaggagatgtctatccatgttctgaaagatcctaattatactagt
caagtgttagattttacaataggacgttgtggttatggatctgttaagttttttgggaag
actgacgttagatgcttagatttagaccaaattgtcaagtttcataagaatgaagtaatt
gtgtatgaagatgaaactaccaaacctatagttggtcaaggccttaacaagcctgctgaa
gttactttggttctccagtcaataacaaccagctttttagggaggcaatttgataatgtt
gtgaagaaattgaaatactttactgagagacagggagctcacttcatttcatttgaacca
gaaaattgtgaatggaagttctcagttaaccatttcagccggtttggcttgacagaagat
gaagaagaggatgttgtaatggacgatccaaatgcagtgcaagaacctgcagagatcaac
tgcaacgagatatctgaaaataatgaaaacagccctatggacttcaccgaatctgtgctt
tgtcattcccttcctgcacatcttgggcttgatccagtaaagatgaaagaaatgagaatg
gttatatttcctgaaaacgagcaggaatttgaggattataatgaatctcctaaatttcaa
aaatcatttacaggtagagaatatatgagaacaactccttttaaggattcttctcagagg
acaaaccaaaaattaaattctctagttgtcagaaagactccactagcattacttgaatac
aatcaaggtagccttgactcaaattctcctggttccattttgatgtcccaaccaaaaaag
gttactcctgttaagcgctcgaaagcagaaggtttcaagctagacctcacacatgaaact
ccaattactctagatcattctcgcaacatagttgatgcaggtttgtttatgggtaggtca
tttcgagtagggtggggccctaatggcatcctagttcatactggaaatttggtggggagt
aagaattcacagagggtcctttcttccataataaatgtagagaaagttgccatcgacaat
gtggtgagagatgaaaatcgtaaaatgcgtaaagaattagttgaatatgcttttgatctt
cctttaagtttacacaaggaaatgaatcatgaattcgaagaagaagtgggatccttcaat
ttgaaacttcaaaaggttgtcttcaatcgtctaatgctttcagatatttgtaggagctat
atagatattgttgaaagacagcttgaagttcctggattatcttcttccgctcgtttagtc
ttgacacaccagataatggtctgggaattgataaaagttcttttttctgaaagggaaaat
gttgggaatagtttggacagtgataatgaggaagacatgatgcaggagcaggatataaaa
gaagattcaccggaatttgacttggaagcactccctcttatccggagggctgaattcagc
tgttggctacaagagagtgtttttcctcaggtgcaatatgaattaggttcattaaaggat
tccagttatcttgaacatatatttcttctcatgactgggcggcagctggatgcagccgtg
caacttgcttcttctaaaggtgatgtgcgacttgcttgtttgctgagccaggctggtgga
ttcactgttggatccaccgtgaagcgcaatgatgttgctctacaacttgatatttggaga
aggaatggattggatttcaactttattgagaaggaacggacacaggtatatgagctgctg
gcagggaatatatttgatgctttgcatgactttgaccttgactggaagagatttctaggg
ctattgatgtggtatcgtctaccaccagataccactcttcctgtaatatttcactcttat
cagcatcttcttaagagtggaagggctccactccctgttccagtttatgctgatgggcct
caagaactggttttgaagtctaatacaaatgaatgtcttgacctctcatattttctcatg
ctgcttcatgctaatgaagatcctgagtttggctttcttaagaccatgtttagtgccttc
tcatcaacggatgacccacttgattatcacatgatctggcaccagcgtgcagtgttggaa
gctattggtgcaatcagttctaaagatctgcatattcttgatatgggattcgtttctcaa
ttgctgtgtttggggcaatgtcactgggccatctatgtggtccttcatatgcccttccgt
gatgattttccacaccttcaggctaaagtaatcaaggaaatactattccaatactgtgaa
atatggagttcacaggaatcacaatttgaatttattgagaacttgggtgttccaagaata
tggctacatgaggctatggcagtttttttcagttaccttgggaatctaccagaggccctc
gaacatttcattgaatgtagaaattggcataaagctcatactatttttacaacttcagtt
gctcataaattattcctttcagctgagcactcagatatatggaagtttgctacttcaatg
gagatgcacaagtctgaaatagaaaattgggaattcggtgctggaatttatatatccttc
tactctttgaggagttctttgcaggaaaacactgaagggagtgaactggattcacttgag
agcagaaatgctgcttgtggggaatttcttggtcgacttaatgaatcattggcagtttgg
ggtgacagattaccagttcaggcaagagttgtttactccaagatggccgaggagataagt
agattacttctatcagatattggggagggttctactcgtgatgctcagttgagttgcttt
gacactatattttctgccccaatgcgagaggatcttcgctcaagtcacttgcaggatgca
gtttctctttttacttgttacctgtcagaaatcacatcatag
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