Cucumis sativus (cucumber): 101222457
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Entry
101222457 CDS
T02486
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101222457
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101222457
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
101222457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
T2SSE
DEXQc_Suv3
PARP_regulatory
Motif
Other DBs
NCBI-GeneID:
101222457
NCBI-ProteinID:
XP_011650152
LinkDB
All DBs
Position
1:complement(3799693..3823583)
Genome browser
AA seq
2084 aa
AA seq
DB search
MLFQIPRLTSSLREPFDVDQAYLHRKLLLQNHKPTHSVPPGESELARKIVYQWDEASFEI
RQAYKQFIAGVVGLVDREVPSEELGEVALTIYCLFGEKKEENDLDCAAKNMEELQKIIGN
TISDARLQKVISLAQKLFILQPRDHATALMAEKHVNKGDSNVEFGADLAFREPNRFLVDV
SLENSDLLDMGSTAPTFYDREHVHDDSINFDLPNEKGKLNLSWLRDACGEITKKSTSQLS
LDELAMAICRVLHSEKPGEEIAGDLLDLVGDGAFEFVQDLISHRRELVDDIHHGLTIIKT
EKTNSSSQSRMPSYGTQVTVQTESERQIDKLRRKEEKKNKRGIEYGSESDFSAISFSSLV
QASQRKSPFDDLIGSGEGTNSLTVSALPQGTQRKHFKGYEEVIIPAIPAAQMKPGEKLIE
IKELDDFAQAAFRGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEISQ
HFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEETQ
MIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQT
MIRIVGLSATLPNYLEVAQFLRVNPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNELL
NEICYKKIVDALKHGHQAMVFVHSRKDTAKTAEKLVEIGRKYDDLELFKNDAHPQFGIIK
KEVIKSRNKDLVELFNFGVGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPA
HTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLL
TSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDEV
MADPSLSSKQRALITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNE
MLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSIRTSCPLEVKGGPSNKHGKISIL
IQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRRI
WPHQHPLRQFDKDLSSDILRKLEEREADLDRLQEMQEKDIGALIRYAPGGRLVKQYLGYF
PLIQLSATVSPITRTVLKVEVLITAEFIWKDRFHGGSQRWWILVEDNENDHIYHSELFTL
AKKKAREPQRLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPESHTSHTEL
LDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHVLYHSDDNILLGAPTGSGKTISAELA
MLRLFNTQPDMKVVYIAPLKAIVRERMNDWKNCLVSRLSKKMVEMTGDYTPDLMALLSAD
IIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTER
KVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMN
KPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMPEEELQMILCQ
VIDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVII
KGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPRKSFYKKFLYEPFP
VESSLKEQLHDHINAEIVSGTICHKEDAVHYLSWTYLFRRLMVNPAYYGLDSMEPEILSS
YLSRLVQSTFEDLEDSGCIKMEEDSVEPMMLGSIASQYYLSYITLSMFGSNIGPDTSLEV
FLHILSAASEYDELPVRHNEENYNGALSERVRYKVDKDRLDDPHVKANLLLQAHFSQLEL
PISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALWM
IPCMNDDLASSLKKSGYLTLQQLLDLPKTALQNLIGNFPASKLTQDLQIFPRVQMKIKLL
RKDDDAEKAPSLNIRLEKISSRKNRTRAYAPRFPKIKDEAWWLVLGNTSTSELYALKRVS
FSDRLVTTMQLPPKRNDFQEMKLILVSDCYLGYEQEYSIKELLN
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcagattccccgattgaccagctccctcagggagccattcgatgtcgaccag
gcgtatctccatcgcaagcttcttcttcagaaccacaaaccgacccactccgtacctccg
ggcgagtcagagctagcgcggaagatagtttatcaatgggacgaagcatcctttgaaatt
cgacaagcctataagcagttcattgcgggagttgttgggttggtggacagagaagtacca
tccgaggagcttggtgaggtagcactgactatttattgcctttttggcgagaaaaaagaa
gaaaatgatctcgactgtgctgctaaaaacatggaagaattgcaaaagattattggcaat
acaatttcagatgctaggctgcagaaagttatttctctagctcagaaactatttattttg
cagccaagggaccatgcaactgcattgatggcagagaagcatgttaacaagggtgactcc
aatgtagagtttggtgctgatctagcttttagagaacctaataggtttctggtggacgtg
tctctggaaaattcagatttactggacatgggtagtactgcacctacattttatgacaga
gaacatgtgcatgacgattccataaactttgatctccctaatgaaaaaggaaagttaaat
ttgagttggttgagggatgcatgtggcgagataacaaaaaaaagtacctcacaactttct
cttgatgaacttgcaatggccatttgccgagtccttcattcagaaaaacctggcgaggag
atagctggagatctgttggatcttgttggtgatggagcatttgagtttgttcaagatctt
atttcacaccgaagggaacttgttgatgatattcatcacggattaacaataataaaaact
gagaaaacaaattcaagctcacaatcacgaatgcctagctatggaactcaggttaccgtt
caaacagaatcagagagacaaattgataagcttcgacgtaaggaggaaaagaaaaataaa
cgaggaattgaatatggttctgaaagtgatttctctgctataagcttttcttctctagtt
caagcaagtcaaaggaaaagtccatttgacgatcttattggatctggtgagggcactaac
tcccttacagttagtgcccttcctcaaggaacacaaaggaagcattttaagggatatgag
gaggtaattatccctgcaatcccagcagcgcaaatgaaacctggagaaaagctgattgaa
ataaaggagttggatgattttgctcaagctgcctttcgcggattcaaatacttaaatcgt
atccagagtcgcatttttgatactgtttataacaccaatgagaatatactagtctgcgct
ccaacaggggctgggaaaaccaatatagccatgatctccattctccacgagatttcacag
cacttcaaggatggatatttgcataaagatgaatttaagatagtttatgttgctcctatg
aaggcgttggctgcagaggtcacatctacttttagccatcgtttatcacctttgaatgtt
actgtaagagaactaactggagacatgcaactttcgaagaatgaacttgaagaaactcag
atgatagtgacaacacctgagaaatgggatgtcattactcgcaaaagcagtgacatgtca
ctgtcgatgttagtcaaactcttaattattgatgaggtacatcttctaaatgatgaccga
gggccggtaattgaggcactagttgcacgaactcttcgtcaggtggagtcaacacaaaca
atgatacgtattgttggcctttcagccactctccctaattacttagaggttgcacagttt
cttagagtgaatccaggaacagggcttttcttctttgattctagctaccgtcctgtgccc
cttgcacaacaatatattggtatcagtgagcataactttgcagctcgcaatgaattgtta
aatgaaatatgctacaagaagattgttgatgcattaaagcatgggcatcaagcaatggtg
tttgttcattctcgaaaggacacagcaaagacagcagagaaactggtcgaaattggtcga
aagtacgatgatcttgaactatttaagaatgatgcgcacccgcaatttggtattatcaag
aaagaagtcatcaaatccaggaataaagatctagtagaactttttaattttggagttggc
gtgcatcatgctggaatgctacgctctgatagaggtttaactgaaaggctcttttctgat
ggattgttgaaggttcttgtttgtacagccaccttagcatggggtgtaaatctacctgct
catacagttgttataaagggcacccaattgtatgatccaaaagctggtggatggcgagat
ttgggtatgcttgatgtcatgcagatttttggacgagctgggagacctcagttcgacaaa
agtggcgaaggcatcataattacatcgcacgataagcttgcccattatttgcgattgcta
acaagtcagctccccatagagagtcagtttattggttctttgaaagataatttgaatgcg
gaggttgcactgggtactgtaacaaatgtgaaagaagcttgtgcctggcttggatataca
tatctatttataaggatgagactaaatcctctggcatatggcattggatgggatgaggtc
atggccgatccatctttaagttcaaaacaaagagctctcataacggatgctgcacgtgca
cttgacaaatcaaagatgatgcgctttgatgaaaaaagtggcaacttttattgtacagag
cttggccgcattgccagccacttctatattcagtattccagtgttgaaacatataatgag
atgttgagacgtcatatgaatgacagtgagattattgacatggttgctcattcttctgag
tttgaaaatattgttgttcgagatgaggagcagagtgagctggagatgtcaatacgaaca
tcatgccccttggaagttaaaggtggcccatcaaataaacatggaaaaatttccatccta
attcagttgtacatttccagaggttccattgacaccttctctctagtctccgatgctgct
tatataagtgctagcttggctcgtattatgcgagctctatttgaaatatgtttgagaagg
ggttggtgtgaaatgactttgttcatgttggaatactgcaaagctgttgatcgtcgaata
tggccacaccagcatcctctaagacaattcgacaaggatctttcttcagatatattgcgc
aagcttgaggagcgagaggctgacttggatcgtctacaggagatgcaggaaaaagatata
ggagcattgattcgttatgcacctggtggaagattggttaagcagtatttaggatatttt
ccactaatccagttgtcagcaactgtcagtccaataacaagaaccgtcctaaaggttgag
gtgctcataacagccgagttcatatggaaagatcgttttcatggtggttctcaacgctgg
tggatactagttgaggacaacgagaatgaccatatctatcactctgagcttttcactcta
gcaaagaagaaggctagagagcctcaaaggctttcattcacagtcccaatatttgaacca
catccacctcaatattacattcacgctgtttctgactcttggctgcaagcagaagcattt
tacaccatatcttttcaaaacttagcactaccggagtcccatacatcacacactgagctc
ctagacttgaagcctcttccaataactgctcttggtaacagaagttatgaatccctgtat
aaattttcacattttaatccaatacaaacacagatttttcatgtgttgtatcattccgat
gataacattctgttgggtgctcccactgggagtggaaaaactatatctgctgaacttgct
atgcttcgtctcttcaatactcagcctgatatgaaggttgtctacatagcacctctgaag
gccattgttcgtgaaagaatgaatgactggaaaaattgtcttgtttctcggctcagcaaa
aaaatggttgaaatgactggagactatacccctgatctgatggcacttttgtcagcagat
attattatatcaaccccggaaaagtgggatggtattagtagaaattggcacagtcgaagc
tatgttacaaaggttggactaatgattctggatgagatccacttattgggagcagatcga
ggtcccattcttgaggttattgtttcaaggatgagatatatatcatcacagactgagcga
aaagttagatttgtaggcctttcaactgctttagcgaatgcaagcgatttgggtgactgg
ttaggtgtgggagaaaatggacttttcaatttcaaaccaagtgtaagaccagtgcctctt
gaagttcatatccagggataccctggaaagttctactgtcctagaatgaacagtatgaat
aaaccaacgtatgcagccatctgcacccattcaccaaccaagccagttcttatatttgtc
tcatctcgtcgtcagacaagactcacagcattggaccttattcagtttgcagcttcagat
gagcatccaaggcaatttcttaatatgcccgaagaagagcttcaaatgattctttgtcaa
gttattgatcaaaatctcaggcacaccttgcagtttggtatcgggctacaccatgcaggt
ctaaatgatggggataggtctatggttgaggaactgtttgcaaacaacaaaattcaggta
ttggtttgtactagtacattagcttggggtgtgaaccttcctgcacatctagttattatc
aagggaacagaatattatgatggaaaatcaaagagatacgttgactttccaatcacagat
attctgcaaatgatgggtcgtgcaggtcgaccacagtatgatcaacatggaaaagcagtt
attcttgtccatgaacccagaaagagcttttataagaagtttttgtacgaaccattccct
gttgagagtagtctgaaggagcagttgcatgaccatatcaatgctgagatagtttcgggc
accatttgtcataaagaggatgcagtgcactatcttagctggacctatttgtttcgtagg
ctgatggtaaatcctgcttactatgggttggatagcatggaacctgaaattctaagttcg
tacttgtctaggttagtacaaagcacatttgaggatcttgaggatagtggatgcataaag
atggaggaagacagtgtggagccaatgatgttgggttcaatagcatctcagtattacctc
agctacattactttatcaatgtttggctcaaatataggtccagatacgtcacttgaagta
tttttgcatatcctttctgctgcttctgaatatgatgaacttcctgtgcggcataatgag
gaaaattacaatggtgctctatccgagagggttcgatataaggtggacaaagatcgactt
gatgatccacatgtgaaggcaaatttacttttacaggcacatttttctcagttggaattg
ccaatcagtgactacattactgacttaaagtcggtgttggatcagagtattcgcatcatt
caggctatgattgatatatgtgccaacagtggatggttatcaagctcaattacatgcatg
cgtctattacaaatggtcatgcagggcttgtggtttgatgttgattcggcattgtggatg
ataccgtgcatgaatgatgaccttgcaagttcacttaaaaaatcaggatatctaactctg
cagcaactgttggatcttcccaagacagctttgcaaaatttgattggaaattttcctgct
tcaaaattaactcaggatttgcagattttcccccgtgtccaaatgaagataaaacttcta
aggaaggacgatgacgctgaaaaagctccctctcttaacattagattggagaagataagt
tcgagaaaaaacagaaccagggcatatgcaccacggtttcccaagataaaagatgaagca
tggtggcttgtacttggtaacacctctacgtcggaactgtatgctttaaagagagtttct
ttctctgatcgcttggtcacaaccatgcagttacctccaaaaagaaatgatttccaggaa
atgaaattgattttggtctcggattgttatcttggctatgagcaagaatactccattaaa
gaactgttaaattga
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integrated database retrieval system
