Cucumis sativus (cucumber): 101222548
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Entry
101222548 CDS
T02486
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101222548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101222548
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101222548
FA (Fanconi anemia) pathway
101222548
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
KH_NucS_shadow
Motif
Other DBs
NCBI-GeneID:
101222548
NCBI-ProteinID:
XP_004138254
UniProt:
A0A0A0LNV2
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Position
1:240741..245372
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AA seq
601 aa
AA seq
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MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ
HFIDVSDHLSPPSPDSDHSLPHSPDLNPLIPGLVSTHPPCPVSDFLRGLGLSLKREWLDA
CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ
VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI
SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT
RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE
LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNTNMGNSVDDSNAVNSV
EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR
RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ
IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaggcgccttcgcctgagctggtcttccgacgaagacttggaacaagactct
cactgccctgattcctccccgacctcccttcaaccaatcattctcgacaacctcaactct
cattttaatcccaacgtttctgaacccgtccaagttcccgattccgacgacgacgaacaa
cattttatcgacgtctccgaccatctctcccctccttctccggattctgatcattctctc
cctcactcccccgacctcaatccgctcattcctggtctcgtttccactcaccccccgtgt
cctgtaagtgacttccttcggggacttggcttaagcttgaagagagagtggttggatgcc
tgtatccgctctctacaagggtctgtaccaggtttcttcagcctcaaccattcggagaaa
ggaaagctgtgtttcgagcagtttttggtttctgatatgaattatgtgggtgctggtgtc
ctgcctgaaaatgttgattctatgcatctcgttgacctccctggtccgtacgtactgcag
gtcgatgaaatagttaacatcagttgtgctctgaaaggtagatatcagactgcccctgct
aatattaagaggtgccttaaactgtcaatgacggatggtgttcaacgaatttttgggatg
gaatacagacctattaagaatcttgaagttttggcccctgctgggttgaaggtagtaatc
agcaatgtaagtgtacgacgtgggcttctaatgctagtacctgaagcttttgaggttcta
ggaggtctggttgaagaattggaggcagctcggaagcggcttgttgatgaagtgaacaag
ccacctagaggaagcagaacgagaacaggcgtagttccttctttggcaagtagagcaaca
cgtgctgcatggccatcagacaatgttcaagagcctgggcatcctagtagaatggtggat
gctgaaccctctcattcaaaccaaggtgctcgcatgttccataggggaaatgaagcattt
actgctccggttgctgatgcatttactacaccagtcagtagaacaaatgctaattctgag
ctatcttctaattttgtttcaaatgttgaggagattcattctcattccattcccagtggt
agagctcatactgagcctactattgtgcccaattcggtagaggactccagtgtggtcaat
tcagtggacaataccaatatgggcaattcagtagacgattccaatgcagtcaactcggta
gaggataccatcatggtcgacatcgagcatcctctcattttatctggcgatagagaaatt
cctttcacttacttggctagtttgtcggctaagttggcagcagcgaaggataagtctcca
ttagttcggggaagaatcaagtgctttttgactggtgtaaaaggatttcaattcaagcga
aggacaaattacgagctacgtgtgtatgtggatgacggcagcctcatttctgaggtcctc
attgatcacgaggttgtgcaaaaagcgatcggccattctccaaaggatgttacggacgct
attgattcttctgatgtcaaagtagtgagtgctatgaaggagactttgagacagtttcaa
attttcttaataaactttgagggtacaatgctggttgagatgaacagaacgtctcttctg
ccagttgtccttgagatgtcggagggttgtctggaatctgatgctcggttgctcttgaga
agacttgcgtgttcaaattctgttccaactgatgaacatgcccgtattatagacgtatcc
ccttaa
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