Cucumis sativus (cucumber): 101222626
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Entry
101222626 CDS
T02486
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04142
Lysosome
csv04144
Endocytosis
csv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101222626
04142 Lysosome
101222626
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101222626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101222626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101222626
Membrane trafficking [BR:
csv04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101222626
Exosome [BR:
csv04147
]
Exosomal proteins
Proteins found in most exosomes
101222626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
101222626
NCBI-ProteinID:
XP_004138417
LinkDB
All DBs
Position
6:1288839..1301503
Genome browser
AA seq
1707 aa
AA seq
DB search
MAAASAPITMKEAITLPSIGINPQFITFTHVTMESDKFICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVQGSTQDHLQIFNIEQKSKMKSHLMPEQVVFWKWI
TPKTLGLVTQTSVYHWSTDGESEPVKVFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKLPGNENPSTLISFATKTLNAGQITS
KLHVIELGAQPGKQSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEQTIISFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
TGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLGDDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIESAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLEVIRAAEDANVYHDLVRYLLMVREKAKEPKVDSELIYAYAKIDRLAEI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMIAVQSNNVSAVNEALNGIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRADVALELAWINNMVDFAFPYLLQFIREY
TGKVDELVKDKIEAAKEVKAKEQEEKDVIAQQNMYAQLLPLALPAPPMPGMGGGPGMPGF
VPGPPQMGGLGMPPMPPFGMPPMGSSY
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccagcgctccgatcaccatgaaggaagccataacgcttccgagcattgga
attaatccgcaattcattacgtttacgcacgtgactatggaatcagataaatttatctgc
gttcgagaaacggcaccgcagaatagtgttgtgattattgacatgaacatgccaatgcag
ccattgaggaggcctataactgcggactcagcacttatgaatcctaattctagaatattg
gccttgaaagctcaagtccaggggtcaactcaagaccacctacaaatattcaacattgaa
cagaagtcaaaaatgaaatcacatttgatgcccgaacaggttgtcttttggaagtggata
acccctaagacattgggcttggtcactcaaacttcagtgtaccattggtctactgatggt
gagtctgaacctgtgaaagtgtttgagagaacagccaatctggctaacaatcagattata
aactataggtgtgatccttctgaaaagtggttggttttgattggtattgcacctggttca
cctgagaggccacaacttgtgaagggcaatatgcaactcttctctgtggatcagcagaga
agtcaagctcttgaagcacatgctgcagcatttgctcaatttaaacttcctggaaatgag
aacccttcaactcttatatcctttgccacaaaaacacttaacgctggacaaatcacgtcc
aagttacatgtcattgaacttggtgcccagccagggaaacaatcatttacaaagaagcaa
gcagatctcttttttccacctgattttgctgatgactttcctgtggcaatgcagatatcg
cacaaatatagtttgatctatgtgatcaccaagctggggctgttatttgtatatgactta
gagacagctgctgctgtatataggaataggatcagcccagatcctatatttttgactgca
gaggcttcttcggtgggaggattttatgctataaacaggaggggtcaagtgttactggct
accgtcaatgaacaaacaattatctccttcgtcagtggccagttgaacaatttagagctt
gctgtcaatcttgctaaaagaggaaatcttcctggtgctgagaatctggttgtccagcgt
ttccaagaactttttgctcaaacaaagtacaaagaagctgctgaattggctgctgagtct
cctcaagggatcctccgcacaccagatactgttgcaaaatttcagagtgtaccggtgcaa
actggtcaaacaccccctctactgcagtattttggaactctattaacgagaggaaagctg
aacgcattcgagtcattggagctgtctcgtttagttgttaaccagaataagaagaacctc
ttggagaactggttgggtgatgacaagttggaatgcagcgaggaactaggggatcttgtg
aagactgtggacaatgacctggcgttgaaaatctatataaaagccagagcaacaccgaag
gtagttgctgcctttgctgagcggagggaatttgacaagattcttatatattcaaagcag
gttggatacacaccggactacttattccttttgcaaacaattctccgaactgacccccag
ggagcggttaactttgcattgatgatgtcacaaatggaaggaggttgccctgttgactac
aacacgataactgatctttttcttcagaggaatttgattcgtgaggctactgctttcctg
ttagacgttttgaagccaaatctacctgagcatgctttcctccagacaaaggtcctagaa
atcaatctggtaacttttccaaatgtagctgatgccatattggctaatggaatgtttagt
cattatgatagacctcgaattgcacaactttgtgagaaggctgggctttacgtgcgagct
ttgcagcattatacggaactaccagatattaaacgagtcatcgtgaacacacatgctatc
gaaccacagtcacttgtagagttttttggtaccttgtctcgtgagtgggctttggagtgt
atgaaggaccttttgcttgtgaatctcagaggcaaccttcagataatagtgcaggttgca
aaggaatattgtgaacagttgggggttgatgcgtgcattaaactttttgaacaatttaag
tcctatgagggcttgtacttcttcttggggtcatatttgagttcgagtgaggatcctgac
attcacttcaagtacattgagtctgctgctaaaacaggacagattaaggaggttgaacgt
gtaacaagagaatccaacttctatgatgccgagaaaaccaagaactttttaatggaagct
aagcttccagatgctcgtcctttgattaatgtgtgtgaccggtttggatttgttccagat
ctcacacattacctttacacaaataacatgctccgctacattgaaggctatgttcaaaag
gtgaaccctgggaatgctcctttagttgtgggtcagctgctggatgatgagtgtcctgaa
gatttcattaagggtttgattctctctgtccgatctttgcttcctgtggagcccctagtg
gatgaatgtgaaaagagaaatcgattgcggttgcttactcaatttttggagcatctggtg
agtgagggaagtcaagatgtacatgtacataatgctctgggtaaaattattattgatagc
aataataatccagaacacttcctcaccaccaatccgtactacgattcacgtgttgtgggg
aaatattgtgaaaaacgtgatcccactttagctgttgtggcctatcgacgtggacagtgt
gatgatgagcttattaatgttacaaacaaaaactctttgttcaaactgcaagcaagatat
gtggttgagaggatggatggtgatctttgggagaaggttcttaaccctgaaaatgaatat
agaaggcagctcatcgaccaagttgtgtcaacagccttgccagaaagcaagagtccagag
caagtttcagctgctgttaaggcttttatgacagcagatctgccacatgagttgattgaa
cttcttgaaaagattgtcctgcagaactctgcctttagtggaaactttaatctgcagaat
cttcttatattgacagccatcaaggctgatccatccagagttatggactacattaacagg
ctagataattttgatggacctgcagtcggggaagtggctgtggaggcacagctgtatgaa
gaggcatttgcaattttcaagaagttcaacttgaatgttcaggctgtcaatgtcctgttg
gataacattcaaagtattgaaagagctgtagagtttgcattccgggttgaagaagatgca
gtttggagccaggtggcaaaggctcaactgagggaaggattggtgagcgatgctattgag
tcctttattcgtgcagatgatgccactcaatttctggaagtcattcgtgctgctgaggat
gcaaatgtgtatcatgatttagttaggtaccttttgatggttagggagaaggccaaagag
cccaaggtggacagcgagctgatttatgcctatgctaaaattgatcggttggctgagatt
gaagaatttattctcatgccaaatgtggctaatcttcaaaatgttggcgaccgcctctat
gatgaagctttatacgaggctgctaaaattatatttgccttcatatctaactgggccaag
ctggctgtcactcttgtaaaactgaagcagttccaaggtgctgttgatgcagcaagaaaa
gcaaacagtgcaaagacatggaaggaagtgtgctttgcttgtgttgatgctgaagagttc
cgcctggcacaaatctgtggtcttaacattattatccaggtggatgatctggaggaggtc
agtgaatattatcagaatagaggatgcttcaatgaattaatttctctcatggagagtgga
ctgggacttgaacgtgctcatatgggtatcttcactgagttgggagtgttgtatgctaga
taccgccatgagaagcttatggagcatatcaaactgttctcgacccggcttaatattccc
aagcttatacgagcttgtgatgagcagcaacattggaaggaactcacctatttgtatatc
cagtacgatgaatttgataatgctgcaaccaccatcatgaatcattctcctgaagcttgg
gatcacatgcaatttaaagatgttgcagtcaaagttgcaaacgtggaattatattataag
gctgtacatttttacttgcaagagcatcctgatctgattaacgatcttctcaatgtgctt
gcacttcgtgtagaccacacaagagttgttgatattatgaggaaggctggtcacttgctg
cttgtgaagccatacatgattgcagttcagagcaacaacgtgtctgctgtgaatgaggcc
ttgaatggaatctatgttgaagaggaagactatgatagattgcgtgaatcgattgatttg
cacgacaactttgatcaaataggccttgcacagaagattgagaagcatgagctacttgaa
atgagacgggttgcagcttacatttacaagaaagccggaagatggaagcaatccattgcc
ttgtcaaagaaagacaatctgtacaaggatgcaatggagacagcatcacaatctggtgac
cgtgaacttgccgaggagttgcttgtttacttcattgaacagggaaagaaggaatgcttt
gcttcatgcctctttgtttgttatgacttaatccgggctgacgttgctcttgaacttgcc
tggatcaacaacatggtcgactttgctttcccatacctgttgcagtttatccgagaatat
accggaaaggttgatgaacttgtgaaggacaagattgaagctgccaaagaagtcaaggct
aaagagcaggaagagaaggacgttattgctcagcagaacatgtatgctcagttgctgcct
cttgctttgcctgcaccacctatgccgggtatgggaggaggaccaggaatgccagggttt
gtgcctggaccaccacaaatgggtggattggggatgcctccaatgccacctttcggcatg
ccacctatgggtagcagctattga
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