Cucumis sativus (cucumber): 101222727
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Entry
101222727 CDS
T02486
Name
(RefSeq) small nuclear ribonucleoprotein SmD3a
KO
K11088
small nuclear ribonucleoprotein D3
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101222727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101222727
03041 Spliceosome [BR:
csv03041
]
101222727
03032 DNA replication proteins [BR:
csv03032
]
101222727
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
101222727
Spliceosome [BR:
csv03041
]
Complex A
U1 snRNP components
Sm proteins
101222727
U2 snRNP components
101222727
Complex B
U1 snRNP components
101222727
U4/U6.U5 tri-snRNP components
101222727
Complex C
U2 snRNP components
101222727
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
101222727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
101222727
NCBI-ProteinID:
XP_004145538
UniProt:
A0A0A0L5W4
LinkDB
All DBs
Position
4:26107563..26109872
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVSFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGS
APGRGAPPSGRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggagcttgggaattccagtgaagctactccatgaggccgcgggccacgttgtg
tcggtggagcttaaaagcggtgagctttacagaggaagtatgatcgagtgcgaggataac
tggaactgccagctcgaaaacatcacctacactgccaaggatggtaaggtttcacaactt
gagcatgttttcatccgaggcagcaaagtcagctttatggtcataccagacatgctgaag
aatgcaccaatgttcaagcgtcttgatgctagaattaaaggtaaaggcgcctcacttggt
gttggcaggggcagggctgttgctatgcgagctaaagctcaagctgctggccgtggaagt
gcacctggtcggggtgctccaccatctggcagaaggtga
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integrated database retrieval system
