Cucumis sativus (cucumber): 101222791
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Entry
101222791 CDS
T02486
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101222791
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csv01009
]
101222791
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101222791
Protein phosphatases and associated proteins [BR:
csv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101222791
Spliceosome [BR:
csv03041
]
Common components
Common spliceosomal components
SR proteins
101222791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
101222791
NCBI-ProteinID:
XP_004139072
LinkDB
All DBs
Position
1:28671913..28677306
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AA seq
285 aa
AA seq
DB search
MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS
DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK
QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG
RSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcaggagttatactccatcgccgccaaggggttatggaagaaggggtcggagc
cccagccctagggggcgctatgtgggacgtggaagagaccttcccaccagccttctagtt
cgtaatcttagccatgactgcaggcctgaggatcttcgtagaccatttggacagtttggt
gctattaaggacatatacctaccgaaggattattatactggagaaccacgcggttttggt
tttgttcaatatgtagatcctgctgatgctgcagatgctaaacaccatatggacggctgt
gttcttctcggtcgggagttgactgtggtatttgctgaagaaaacaggaagaaaccatct
gatatgagggccagagaaagaggaagtgggcgatatcatgatcgaagaagatcccctcca
cgttcgcctcgatattcacgttccccagctcaacgacgtgggaggtattctcgttcacca
gcaccacgccatgcaaggtctaggtcccgtagctatgattatgcatcccaaccaccaaaa
caaagggcttactcaagatcactttcccctcgtgacagaccagacagtcgagagaggtct
ttcccacgacaggagagccgtggaaggtcatactcccgatctccacgtctcgatggttca
aggagtaggagtcaaagtccaacacaacctggaagtcgaagtccaagccctgtaagagga
cgaagtctaagtaggagcaggagtaggagcaaaagtgttggccggagccggagccgaagc
cgtagtccccgacgtagcccaagacatgaagaagagtatagaagtgaaccgaatggtgat
aggagcccaagtcaatag
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