Cucumis sativus (cucumber): 101223140
Help
Entry
101223140 CDS
T02486
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101223140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101223140
Membrane trafficking [BR:
csv04131
]
SNARE
SNAP-25[C] (Qc)
STX8
101223140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
NPV_P10
DUF2976
UBC_like
SlyX
Motif
Other DBs
NCBI-GeneID:
101223140
NCBI-ProteinID:
XP_004149588
LinkDB
All DBs
Position
3:3838336..3841680
Genome browser
AA seq
233 aa
AA seq
DB search
MMAPSDLWIKEYNEASKLGDDINGMISERSSFPATGPESQRHASAIRRKITILGTKVDGL
QSLLLKLPVKQPLSEKEINRRKDMLVQMRSKVKQMASTLNMSNFANRDSLLGPEMKSADV
MSKTAELDNQGLVGFQRKIMKEQDEGLEKLEETITSTKHIALAVNEELSLHTRLIDDLDQ
HVDVTDSQLARVQKRLGIMNKRAKGSCSCFGMLLSVVGIVVLITVIWLLVQYL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaccttctgatttatggataaaggaatataatgaagcttctaagcttggtgat
gatatcaatggcatgatttctgaaaggagttcctttcctgcaactggaccggaatcccaa
cgtcatgcttcggccattcggaggaagatcacaattttggggactaaagttgatggctta
cagtcccttttgttgaaacttcctgtaaagcagcccctgtctgaaaaggagataaatcga
cgtaaagacatgcttgttcagatgagatcaaaagtaaagcagatggcctcaacgttgaac
atgtcaaactttgctaaccgagacagtttacttggcccagagatgaaatcggcagatgta
atgagcaagacagctgaactagacaatcaaggacttgttggttttcaaagaaaaatcatg
aaggagcaagatgaaggtcttgaaaagctggaggagactattacaagtacaaaacatatt
gcattagcagtcaatgaagaactcagtcttcacactcgcctaattgatgacttggatcaa
catgttgatgttacagactctcaattagcgagggtgcagaagaggttgggtataatgaac
aagcgagcaaaggggagctgctcttgctttggaatgcttctgtctgtggttggtattgtg
gttcttatcactgtcatatggctgctcgtccaatacttgtaa
DBGET
integrated database retrieval system