Cucumis sativus (cucumber): 105434482
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Entry
105434482 CDS
T02486
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105434482
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105434482
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
105434482
NCBI-ProteinID:
XP_031742281
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Position
1:complement(15697618..15699352)
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AA seq
405 aa
AA seq
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MGVIKYSNLLVTTFLMSLLSFIIESRSHVDVIFPLRKYGNIVSGADVTEALKDAWNDACA
SVRPSAVVIPKGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTLS
GGGVFDGQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIVKRITSLDSKNFHVNILGCN
NLTFKGVNIIAPEDSPNTDGIHIGRSIGISILKSQIATGDDCISLGDGSKRVKITNVTCG
PGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPNAGIATDMHFSDITM
VNVSNPILIDQEYCPWNQCNREIPSNIKINNVSFKNIRGSSATPVAVKLICSSNQPCEEV
KVANIDLVYNGINGPITSQCMNVKPIVSGIQNPSICSSSYTTASK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgattaagtattcaaacttattggttaccacattcttgatgtcattgctatca
tttattattgagtctcgatctcatgttgacgttatttttcctttgaggaagtatggtaat
attgtgtctggtgctgatgtcactgaggctttgaaggatgcatggaatgacgcatgtgca
tctgttcgtccaagtgcggtggttattccaaagggaatttttaaagtaagagaaggagaa
tttaaaggcccttgcaagagcccgattgaaattcgagttcgtggaacattgcaggctcca
aaacaccctcatggagatagttggattacttttgcatatgttgatagaatgacactatcg
ggtggaggagtttttgatggccaaggaaaggcaggttgggaaaagaatgattgtcataaa
cgtatagattgtgctaacctccctattagtttaagattcgacttcattaccaattcaatt
gtgaagagaataacatcactcgatagcaaaaacttccatgtcaacatcctagggtgcaac
aacctcacattcaaaggtgtcaacataattgcaccagaagatagtcccaacacagatgga
atacacattggtcgatcaattgggatctcaatcttaaaatctcaaatagcaacaggagat
gattgcatctcacttggagatggaagcaaacgagtgaaaatcaccaatgtgacatgtggg
ccaggtcatggaataagcataggaagtcttggaaaatacactaatgaagaacctgttgaa
ggtgtcatagtaaagaattgcacaataatgaacaccactaatggtgttagaatcaaaaca
tggccagcctctcctaatgctggtattgccaccgacatgcatttttcagacattacaatg
gtcaacgttagcaacccaattctcatagaccaagagtattgtccatggaatcagtgcaat
cgcgagattccgtcaaatattaagattaataacgtgagcttcaagaacattagaggaagt
tctgcaactcccgtggcagtcaaacttatttgtagtagcaaccagccatgtgaggaagta
aaagtagccaacattgaccttgtttataatggaataaatggtcctattacatctcaatgc
atgaatgtgaaaccaatcgtttcaggaatacaaaatccttcgatttgttcttcttcttat
actaccgcttcaaaatga
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