Cucumis sativus (cucumber): 105434511
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Entry
105434511 CDS
T02486
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105434511
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105434511
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
105434511
NCBI-ProteinID:
XP_031742552
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All DBs
Position
1:complement(23164869..23166613)
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AA seq
405 aa
AA seq
DB search
MCVIKYLNLSITTFLMSLLSFTIESESHVDVVFPLRKYGNVVSGADVTEALKDAWNDACA
SVRPSAVVIPRGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPYGDSWITFAYVDRMKLS
GGGVFDGQGKAGWEKNDCHKHKNCANLPISLRFNFVTNSIVRRITSLDSKNFHVNILGCN
NLTFQGVNIIAPGDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVTCG
PGHGISIGSLGKYTNEEPVEDVIVKNCTIINTTNGVRIKTWPTSPVAGIATNMHFSDITM
VNVSNPIVIDQEYCPWNQCNRKIPSNIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV
KLSNIDLIYNGIKGSITSQCMNVKPIIYGIQNPPICSSSYTTASK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgattaagtatttgaacttatcgattactacattcttgatgtcattgctatca
tttactattgagtctgaatctcatgttgacgttgtttttcctttgaggaagtatggtaat
gttgtgtctggtgctgatgtcactgaggctttgaaagatgcatggaatgacgcatgtgca
tctgttcgtccaagtgcggtggttattccaaggggaatatttaaagtaagagaaggagaa
tttaaaggcccttgcaagagccctattgaaattcgagttcgtggaacattgcaagctcca
aaacacccttatggagatagttggattacttttgcatatgttgatagaatgaaactatcc
ggtggaggagttttcgatggccaaggaaaggcaggttgggaaaagaatgattgccataaa
cataaaaattgtgctaacctccctattagtttaagattcaactttgttaccaactcaatt
gtgaggagaataacatcacttgatagcaaaaacttccatgtcaacatcctagggtgcaac
aacctcacattccaaggtgtcaacataattgcaccaggagatagtcccaacaccgatgga
atacacattggtcgatcaattgggatctcaatcttgaaatctcgaatagcaacaggtgat
gattgcatctcacttggagatggaagcaaacgaataaaagtcaataatgtgacatgtgga
ccaggtcatggaataagcataggaagtcttggaaaatacactaatgaagaaccggttgaa
gatgtcatagtaaagaattgcacaataataaacaccactaatggtgttaggattaaaaca
tggccaacctctcctgttgctggtattgccacaaatatgcatttttcagacattacaatg
gtcaacgttagcaatccaattgtcatagaccaagagtactgcccatggaatcaatgcaat
cgcaagattccatcaaatattaagattaataaagtgagcttcaagaacattagaggaagt
tctgcaactccagtggcagtcaaacttatttgtagtagcaacctaccatgtgaagaagta
aaattatccaacattgacctcatttataatggaataaaaggttctattacatctcaatgc
atgaatgtgaaaccaatcatttatggaatacaaaatcctccgatttgctcttcttcttac
actactgcttcaaaatga
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