KEGG   Cucumis sativus (cucumber): 105434823
Entry
105434823         CDS       T02486                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03030  DNA replication
csv03410  Base excision repair
csv03420  Nucleotide excision repair
csv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105434823
   03410 Base excision repair
    105434823
   03420 Nucleotide excision repair
    105434823
   03430 Mismatch repair
    105434823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csv03032]
    105434823
   03036 Chromosome and associated proteins [BR:csv03036]
    105434823
   03400 DNA repair and recombination proteins [BR:csv03400]
    105434823
DNA replication proteins [BR:csv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105434823
  DNA Replication Termination Factors
   ELG1-RFC complex
    105434823
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105434823
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105434823
  Check point factors
   HRAD17(Rad24)-RFC complex
    105434823
SSDB
Motif
Pfam: RCF1-5-like_lid RFC_C DNA_pol3_delta2 COMPASS-Shg1
Other DBs
NCBI-GeneID: 105434823
NCBI-ProteinID: XP_011650816
LinkDB
Position
3:complement(8134849..8139713)
AA seq 615 aa
MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL
TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP
STQSSIVSKFKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS
TSASATFKEEMSSSDEMMTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER
YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF
GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP
LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV
RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNLRQAIRSLEASWKKSQLFDE
DENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKF
LDEELQRRVEGFYADYNKLEEKVFVSEKGSGEEAVIKGQHDSIRKNVNHFLKIEEFIAKF
MSCYKGEANAMKINK
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggccacacaacaagaacaacaaccatccctccgccgttccttgtcagattccaatcac
cgccgccgacgcaaccgacgccgcgcgacgatttcaactacatcgtcaaaatcgtcatgg
agttcaaagctaggcaaacttctggctcgtttagccttcttgtcacgtgactcagaccta
accgaagaaagccttgaagctcacaacaaacgaatcaatgacctcgataccctcgacaaa
accccaaaatccagcccttactaccgtggactcaccgattcctctctcgccattaattac
catcacggccctctcaattccaccccctaccacgtaacctacgccacctcagctgccccc
tccacccaatcctccatcgtctccaaattcaaggactacatggccccatgcctccgcaaa
caacaaccacaatcaccccaaactagtccacgcaaggtgccacgtcaacaccagagaatc
caaactgttacaacggctacaactgttgtgacaaaagcgacgtggttctcttcggggtcg
acgtcagcgtcagcgactttcaaggaggagatgagtagtagtgatgagatgatgacgaag
aagaagctgttgagggagagattagtcgtaccgaacggtggcgggcgtcgtgacagcggt
ggcggaagtggcagcagtggaggaggagtggtggtggtggaggagatggaaaaagagagg
tatagttggggagatagttgtagaccaaaagttttggaggattttatatgtaataaaaaa
acggcaattgaattgaaggaaatggtaaaagaaaagggatgtggacattactatatattt
gaaggagcacctggagttgggaagaggactatgattcaagctatgcttcgtcaagctttt
ggaaatcaatcaatggagatcaaagaagtggtcaaggtttttgacttgaagagtgaaatg
ttgggaagcatagaagtaaaagtgaaagaatcatctcattacgtggaagtcaatatgtca
caaaccaaagggtttgagaaacaagtcatcgtccagctcatgaaagaatctcactcccct
ttgccatgtaatcatgccaattgtcgagggatattgttgtgtgaagcagatcaattatca
attgaaaccctaatgtacataaaatgggcaatggaaaggtacaaaggttgcagcaaaatc
ttcttctgctgttctgatgcctctaagcttctccttcttagctctctctgcactctcgtt
cgtctctcccctccgtcaaaacaagagattgtggaagtgttggagttcatagcaaaacaa
caaggattcgacttgtcgaagcgattggcggagagaattgccgacaattccaggaacaat
cttcgacaagccatacgatccttagaggcttcctggaaaaaaagtcaattgtttgatgaa
gatgagaataaactattgacgggttgggaagacgacattgcagatgttgctaagaagata
gtcgaagagcaaagcccaaaacagttgtatatagttcgtggaaaactcaaaaagcttatt
gaatatgacgtatcccccaatttcatttttaggactttagtagatgaattaaagaagttt
ttggatgaagaattacaacgtcgtgttgaaggtttctatgctgattataataaattggag
gaaaaagtatttgttagtgaaaaaggcagtggggaagaggcagttatcaaagggcagcat
gattcaattagaaagaatgttaaccatttcttgaagattgaagaattcatagccaagttc
atgagctgctacaagggagaagcaaatgccatgaaaataaataaataa

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