Cucumis sativus (cucumber): 105434823
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Entry
105434823 CDS
T02486
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03030
DNA replication
csv03410
Base excision repair
csv03420
Nucleotide excision repair
csv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105434823
03410 Base excision repair
105434823
03420 Nucleotide excision repair
105434823
03430 Mismatch repair
105434823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csv03032
]
105434823
03036 Chromosome and associated proteins [BR:
csv03036
]
105434823
03400 DNA repair and recombination proteins [BR:
csv03400
]
105434823
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105434823
DNA Replication Termination Factors
ELG1-RFC complex
105434823
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105434823
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105434823
Check point factors
HRAD17(Rad24)-RFC complex
105434823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
105434823
NCBI-ProteinID:
XP_011650816
LinkDB
All DBs
Position
3:complement(8134849..8139713)
Genome browser
AA seq
615 aa
AA seq
DB search
MATQQEQQPSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDL
TEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHVTYATSAAP
STQSSIVSKFKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATWFSSGS
TSASATFKEEMSSSDEMMTKKKLLRERLVVPNGGGRRDSGGGSGSSGGGVVVVEEMEKER
YSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF
GNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSP
LPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIFFCCSDASKLLLLSSLCTLV
RLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNLRQAIRSLEASWKKSQLFDE
DENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKF
LDEELQRRVEGFYADYNKLEEKVFVSEKGSGEEAVIKGQHDSIRKNVNHFLKIEEFIAKF
MSCYKGEANAMKINK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaacaagaacaacaaccatccctccgccgttccttgtcagattccaatcac
cgccgccgacgcaaccgacgccgcgcgacgatttcaactacatcgtcaaaatcgtcatgg
agttcaaagctaggcaaacttctggctcgtttagccttcttgtcacgtgactcagaccta
accgaagaaagccttgaagctcacaacaaacgaatcaatgacctcgataccctcgacaaa
accccaaaatccagcccttactaccgtggactcaccgattcctctctcgccattaattac
catcacggccctctcaattccaccccctaccacgtaacctacgccacctcagctgccccc
tccacccaatcctccatcgtctccaaattcaaggactacatggccccatgcctccgcaaa
caacaaccacaatcaccccaaactagtccacgcaaggtgccacgtcaacaccagagaatc
caaactgttacaacggctacaactgttgtgacaaaagcgacgtggttctcttcggggtcg
acgtcagcgtcagcgactttcaaggaggagatgagtagtagtgatgagatgatgacgaag
aagaagctgttgagggagagattagtcgtaccgaacggtggcgggcgtcgtgacagcggt
ggcggaagtggcagcagtggaggaggagtggtggtggtggaggagatggaaaaagagagg
tatagttggggagatagttgtagaccaaaagttttggaggattttatatgtaataaaaaa
acggcaattgaattgaaggaaatggtaaaagaaaagggatgtggacattactatatattt
gaaggagcacctggagttgggaagaggactatgattcaagctatgcttcgtcaagctttt
ggaaatcaatcaatggagatcaaagaagtggtcaaggtttttgacttgaagagtgaaatg
ttgggaagcatagaagtaaaagtgaaagaatcatctcattacgtggaagtcaatatgtca
caaaccaaagggtttgagaaacaagtcatcgtccagctcatgaaagaatctcactcccct
ttgccatgtaatcatgccaattgtcgagggatattgttgtgtgaagcagatcaattatca
attgaaaccctaatgtacataaaatgggcaatggaaaggtacaaaggttgcagcaaaatc
ttcttctgctgttctgatgcctctaagcttctccttcttagctctctctgcactctcgtt
cgtctctcccctccgtcaaaacaagagattgtggaagtgttggagttcatagcaaaacaa
caaggattcgacttgtcgaagcgattggcggagagaattgccgacaattccaggaacaat
cttcgacaagccatacgatccttagaggcttcctggaaaaaaagtcaattgtttgatgaa
gatgagaataaactattgacgggttgggaagacgacattgcagatgttgctaagaagata
gtcgaagagcaaagcccaaaacagttgtatatagttcgtggaaaactcaaaaagcttatt
gaatatgacgtatcccccaatttcatttttaggactttagtagatgaattaaagaagttt
ttggatgaagaattacaacgtcgtgttgaaggtttctatgctgattataataaattggag
gaaaaagtatttgttagtgaaaaaggcagtggggaagaggcagttatcaaagggcagcat
gattcaattagaaagaatgttaaccatttcttgaagattgaagaattcatagccaagttc
atgagctgctacaagggagaagcaaatgccatgaaaataaataaataa
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