Cucumis sativus (cucumber): 105435721
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Entry
105435721 CDS
T02486
Name
(RefSeq) uncharacterized protein LOC105435721
Organism
csv
Cucumis sativus (cucumber)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
RVT_3
Retrotrans_gag
rve
Integrase_H2C2
SH3_Tf2-1
Motif
Other DBs
NCBI-GeneID:
105435721
NCBI-ProteinID:
XP_031742199
LinkDB
All DBs
Position
1:complement(14078351..14085673)
Genome browser
AA seq
2290 aa
AA seq
DB search
MASKKAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSILKQLMESPKAGIVIKEN
PLYNDYDSASSRSLKEAHPDVMSVMMADVAVETAMAEMERKINLLMKVVDERDHEIAALK
EQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQYG
GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQ
LVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
PVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDME
LSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTSKESMVVNTTPLKFSKGKEARVEKKDD
GSERRRLTLKERQEKVYPFPDSDIADMLEQLLEKQLIQLPECKRPEQAGKVDDPNYCKYH
RVISHPVEKCFVLKELILRLAREKRIELDLEEVAQTNHAEVTIMSEASSSRLIFEQRKSL
VQFGTFEPIVVQFFQEISYEDPQGEKRPIEEDDEGWIVDEDPEVVACHAINTTEEEIIPP
RSLEGEGVSKDLSRFNVEDLLSLPQETKTILIDALLNSRASSSSTPTMTYESGSYCMSID
FSDEDLLLGSKLHNRPLYVSGYVREQRVDRILIDNGSAVNIMPKSTMWQLGILMDELSNS
KLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTTYKLLLGRPWIHGNGVVTST
LHQCFKFYQDGVKKVEADSNPFSEAESHFADANFALCPSVKAQERRITIHGVSKRFESWD
IEIIKESFTTPLTKIAKQEVKVDLVEANLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFK
SLEIHDRPELSSTQKKLLREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEED
DNTDVKEGDNQRISVFDRIRPSVARPVVFERLSMTEAERERLQSVPNLERHSVFRRLTTT
PIKEESTCHALTTTRPSAFERLGVSKKKNVQAPRAPIFNHLGDKGSHDNIDSNIDTKKKE
PMSRVKVWRRIKHTDVDNYRSKKFPCETKENGEIHSNVPSRMKRKTFVTLNTSQGSLKVK
RHDVILTNPEKEGSEQGECETSCHHITIIEESETGTHEEDAENAPQSLEDGGQSTVDELK
EVNLGTIEEPRPTFISASLSNEEVDKYMSLLTEYRDIFAWSYKEMPGLDPKVAVHHLAIK
PGYRPIKQAQRRFRPELIPQIEVEVNKLIEAGFIREVKYPTWIANIVPVRKKNGQLRVCV
DFRDLNNACPKDDFPLPITEIMVDATTGHEALSFMDGSSGYNQIRMALSDEEMTAFRTPK
GIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHRYVECYVDDLVVKTKRRQDHLKDLKVVF
DRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRGIEIDQSKIDAIQKMSRPKSLHDLRSLQ
GRLAYIRRFISNLAGRCQPFQKLMRKGENFVWDEACQNAFDSIKKYLLTPPVLGAPVPDK
PLILYIAAQERSLGALLAQEEVKGKERSLYYLSRTLIGAEVNYSPIEKMCLALFFAIDKL
RHYMQAFTVHLVAKADPIKYVLSRPIIAGRLAKWAVLLQQYDIVYIPQKAIKGQALADFL
ADHPIPSDWKLCDDLPDDEVFFTEVMEPWTMYFDGAARRSGAGAGIVLISPEKHMLPYSF
ALSELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFA
YARQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVRPEC
QEVNMATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSLEG
LFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCEPC
QYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEAIS
LREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYNAA
ANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAV
LPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDKHV
KPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIGPI
NGKFLKKFYA
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaagaaagctgcatccaaatcttcagctgcaagcgacacctacacgggacct
attacccgtagtcgttccaaggggatcatccaagggcaagaccaaggttccgccatcgcg
cagagcatcctgaagcaattgatggaatctcctaaagctggaattgtcatcaaggaaaat
cctctatataatgattatgattctgcctctagcaggtcactgaaagaagcacacccagat
gtgatgtccgtcatgatggctgatgtagcagtcgagactgccatggcggagatggagaga
aaaattaatctcctgatgaaggttgttgatgaacgagaccacgaaattgcagctttaaag
gagcagatgcagactcgtgaaactgctgaatcgagtcaaactcctgtcgttaaagttgat
gacaaagggaagaacgtggtacaagaaaatcagccacaacaacaatcaacttctgtggct
tctctctcggttcaacaattacaagatatgatcacaaactccatcagagcacaatatgga
ggcccatctcagacttctttcatgtactctaaaccatacaccaaaagaatcgacaacttg
agaatgccgcttggatatcagcctccaaaattccagcagtttgacggaaagggcaatcca
aaacagcacgttgctcacttcgtcgaaacatgtgagaatgcaggatcaagaggagatcaa
ctagtcagacaatttgttcgaagcttgaaaggaaatgcttttgaatggtatactgatctg
gagccagaaagcattgagagttgggaacaactagaaaaggagtttctcaatcgcttctac
agcaccaggcgtactgtaagcatgatggagcttacaaatacgaaacaaagaaagggagaa
ccagtcatcgactacatcaatagatggagagctctaagtcttgactgtaaagatcggctc
accgaactgtcggctgtagaaatgtgcacccaaggcatgcactggggactcctctacatt
ttgcagggaataaagccccgcacatttgaagaactggcaactcgagctcatgatatggag
ttgagcatcgccagtagaggaactaaagattttcttgttcctgaagtaaagaaagataag
aaagagatgaaaggtgctgaaaagatagtgaaaagcacctcgaaagaatctatggtcgta
aacacaaccccgctgaaattctccaaaggaaaggaagcgagggttgaaaagaaggatgat
ggaagcgaaaggcgacgtctgactttaaaagaaaggcaggaaaaagtttacccatttcct
gattcagatatcgctgacatgctagagcaactactagagaagcagctgatccagctgcca
gaatgtaaacgacctgagcaagcaggaaaggtagatgatcccaattactgcaagtatcat
cgggtcatcagtcatccagtagagaaatgcttcgtgctgaaggagctaattctaaggttg
gctcgtgagaaaaggattgagctagatttggaggaagtagctcaaacaaaccacgctgaa
gtgacgataatgtctgaggcttcttcgtcgagattgatttttgagcaaaggaaaagcttg
gtccagttcgggacctttgagcctatagttgtccaattctttcaggaaatctcatacgag
gatcctcaaggagagaaaagaccaattgaagaagacgatgaagggtggatagtggatgaa
gacccagaagtcgttgcgtgtcatgctatcaacacaacggaggaagaaataatccctcca
agatcactagaaggagagggagtatcaaaagacctttcaaggtttaatgtagaggatcta
ttatcacttcctcaagagaccaaaaccatccttattgatgcattgctaaattcaagagca
tcaagttcgagtactccgactatgacatatgagagtggttcttattgtatgtctatagac
ttctcagatgaggatttgttgttgggatctaaacttcataatagacctttgtatgtttct
ggatacgttcgagaacagagagtcgatcgaatcctcattgataatggctcagctgtcaac
ataatgccaaagtcgactatgtggcaattaggcatcttgatggacgagctctcaaatagc
aagctagtaattcaaggttttaaccaaggtagccaaagagcaataggcatgatacggtta
gaactcataattggcgacctaaaggccagtgcattgtttcatgtcatagactcaaggact
acttacaagttgttactagggcgtccttggattcatggaaacggagtagtaacttcaaca
ctgcatcagtgcttcaaattttatcaggacggtgtaaagaaggttgaagccgactctaat
ccattctcagaagctgagtctcacttcgcagatgcaaattttgcgttatgtccctctgtc
aaggcgcaagaaaggcgaatcaccattcatggagtctccaaaaggtttgaaagttgggac
atcgaaatcataaaagaaagcttcactacaccactaactaagatagcgaagcaggaggta
aaggtagatctggtggaagcaaacttgccccaaaggcgaacgaaagacggattcgacccc
aaggcttacaaattgatggcgaaagcaggttatgacttcacagctcacaccgagtttaaa
agcttggaaattcatgaccgacctgagctctcctcaactcaaaagaagcttctacgggaa
ggacattctatacccgtgtcgagaaaaggactcggatacaagtcgccagaaccgatccgt
ataactaaaaaggggaaggaaaaagtggttgacatcaatcatataactatagaggaggat
gacaatactgacgtaaaagaaggtgataatcagagaatctcagtatttgatcgaattaga
ccatctgttgcacgtcccgtagtatttgaaaggctaagcatgacagaggcagaaagagaa
aggctccagtcagtaccaaaccttgagagacattcggtctttcgaaggctaactacgact
cccataaaggaagaaagcacatgccatgccttgacaactacaagaccatcagcctttgaa
aggctaggtgtgtctaaaaagaaaaatgtacaagcaccccgtgctccgatttttaatcat
ctcggggataaaggatcacacgacaacattgattccaacatagatacaaagaagaaggaa
ccaatgtctcgtgtgaaagtttggcgtcgaattaagcatacagatgtcgataattatcgt
agtaagaagtttccttgcgagacaaaggaaaatggagaaattcatagcaacgttccttct
cgcatgaaaagaaaaacttttgttactctcaatacaagtcaaggttcgttaaaggtaaaa
agacatgatgttatactaacgaatcctgaaaaagaagggtcggaacaaggggaatgtgaa
acttcatgtcatcacatcaccattattgaggaatcagagactggaactcatgaagaagac
gcagaaaatgccccacaaagtttagaggatggtggtcaatctactgtagacgagctaaaa
gaggtgaaccttggtacaatagaggaaccacgtccgactttcattagtgcgtccctctct
aacgaagaggtggataaatatatgagtttgctcaccgaatacagggacatctttgcgtgg
tcgtacaaggagatgccaggacttgacccaaaagtagcagtccatcatcttgcaattaaa
cccggatatcgaccgattaaacaagcacaacgacgttttcgaccggagcttatccctcaa
atcgaggtggaagtcaacaagttgatcgaagcaggattcattcgcgaggtcaaatatcca
acgtggatagcaaacattgtccctgttagaaaaaaaaatggacaacttcgcgtttgtgta
gactttcgcgatctgaataatgcatgccctaaagatgattttcccttgcccatcaccgaa
atcatggttgatgcaactactggacacgaggcgttgtcgtttatggatgggtcgtctgga
tataatcaaatacggatggccctctcagatgaagaaatgacagctttcagaactccaaag
ggaatatactgttacaaggtgatgccctttggattgaaaaatgccggcgctacttatcaa
cgtgccatgcagaaagtgtttgatgatatgttgcacaggtatgttgaatgttatgttgat
gatcttgtagtcaaaacaaagagacgacaagaccatttgaaggatctaaaagtcgtgttt
gatcgcttgcgaaaatatcagctaaggatgaaccctctcaagtgtgcgtttggtgtaact
tcaggaaaatttcttggcttcattgtaaggcatcgagggatcgaaatagaccagtccaag
attgatgccattcagaagatgtcaagacctaaaagtttgcatgacctaagaagtctccaa
ggacgactggcttacatccgaaggttcatctctaacttggccggtcggtgtcaacctttt
caaaagttgatgagaaaaggagaaaattttgtgtgggatgaagcttgtcagaacgctttt
gatagcataaagaaatacttgcttactcccccagtgctgggagctccagtacctgacaaa
ccactaatattgtacattgctgcacaagaaaggtccttaggagcattactggcacaagaa
gaggtaaagggaaaggagcgttctctctactatctaagcagaacattaattggggctgaa
gttaactattctcctatcgaaaagatgtgtcttgcacttttctttgccattgataagttg
aggcattatatgcaggccttcacggttcatctagtggcaaaagcagaccctataaagtat
gttctatccaggccaatcatcgctggacgcttagccaaatgggcggttctactccaacaa
tatgacattgtctatattccccaaaaggcgataaaaggacaagcgctagcagacttttta
gcagaccacccaattccttcggattggaagttatgtgatgacctaccagacgatgaggtt
ttcttcacagaagttatggaaccttggactatgtacttcgatggtgcagctcgaagaagt
ggtgcgggggcaggcattgtcctcatttctcctgagaagcatatgttgccttatagcttt
gcactttccgaattgtgttcaaacaatgtggctgaatatcaggctttgataattggcctt
caaatagcattagaaatcggagtgtcattcatagaggtctatggtgattcaaaattgata
atcaatcaactctcgcttcaatatgacgtgaaacatgaagacttgaagccatattttgct
tatgctcgacaattgatggaaaagtttgataatgtgatgttagaacatgtccctagagta
gaaaataagagagcggatgcattggcaaatttagccacggccttgaccatgccagatgat
gtaactctgaacataccactttgtcaacgatggattatacccccagttaggcctgaatgt
caggaagtgaacatggcaacatcctatttgattgatgaagaagattggcgtcaacccatc
atagagtatcttgaacatggaaagcttccaaaggattctcgtcataaaattgagatacga
agaagggcagcacacttcatttattacaagggaactttatatcgccgttctcttgaaggg
ctcttccttcgatgtctcggaaaggaagattcggtaaaagctctaaaggaagtacatgca
ggtgtttgtggagcacatcaatcgggaccaaagcttcaattccagctaagaagaatgggc
tactactggcctaagatgatccaagattcaatagactatgtgaagaagtgtgagccttgt
caataccatgcaaacttcatacaccaacctccagaacctcttcatccaactgtggcttct
tggccttttgaggcttggggactcgatctggttggccccattacaccaaaatcatcagca
ggacattcttatatcctagcagcaacagactatttttcaaggtgggctgaggccatttca
ttgagagaagccaagaaggagaacgtggcagactttattcgaacacacatcatctatcga
tacggtattccacatcgaatcgtgacggataatggaaagcaattctccaatagtatgatg
gacaagttatgtgaaaaattcaaattcaagcaatataagtcatccatgtacaacgcagct
gcgaatggactagcagaagcattcaacaaaacattgtgtaatcttttaaagaaaattgtc
tccaagtcaaagagggattggcaagaaaagatcggcgaggcattatgggcttatcggacg
actcatcgcacccctacaggggttacaccatattcgcttgtttacggtgtggaggctgtc
cttcctctcgaaagggaaattccgtcactaagaatggcagtacaagagggattgactacc
gaagataatgtgaagttacgtcttcaagaattagaagcacttgacgaaaagcgattagag
gctcagcaagcattggaatgttatcaagcgagaatgtccaaagcttttgataaacacgtt
aaacctcgctcctttcaagtcggtgatctagtacttgccgtaaggagaccgatcatcaca
acaaggcatacaggaaataagttcacacctaaatgggatggaccttacattgttaaagaa
gtttatacaaatggcgcatacaagatcgttgatcaagacggactacgaattggcccaatc
aatggtaaatttcttaaaaaattttatgcttaa
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integrated database retrieval system
