Cucumis sativus (cucumber): 105435794
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Entry
105435794 CDS
T02486
Name
(RefSeq) uncharacterized protein LOC105435794 isoform X1
KO
K18734
protein SMG8
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
105435794
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105435794
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
UvdE
Ferritin
Motif
Other DBs
NCBI-GeneID:
105435794
NCBI-ProteinID:
XP_011657037
UniProt:
A0A0A0KGK1
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Position
6
Genome browser
AA seq
1230 aa
AA seq
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MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSASPEPSTSFPPSSPLPSLPRFSD
TVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYHEEE
RGILFLQFSSHRSSVFDVEADYDSEIQEHDFGDLQGMLFMFSVCHVIIYIQEGSRFDTSI
LKKFRALQSAKHVLTPFVKSRATPPLPSRLQSSSASRSVASAPVSNNSSPIRSGSILTRN
ASGISVMSGLGSYTSLFPGQCTPVILFIFVDDFLDGPMISSNVEGIDTASLNQSPSSDSI
SRPNVPVKGSGSVVVLARPVSKSEGGFRKKLQSSLEAQIRFLIKKCRTLTGSDTSHAGSR
GGGASSSAPLFSLDASKAVVLVDRSTNNTAESLEFATSLVEDVLNGKTTSDSLLLESLGQ
SASKEDIVSLKEFIYRQSDILRGRGGMVHSASSGSAGGVGMVAVAAAAAAASVASGKTFT
TPELPSMEIWLSSSQQILQGILSAKGGCIDEVEINKRKPRHRHIHSSSIEGNALKGMDPL
DIAVSWLESGKGLNMKFSTSWCERALPAAKEVYLRELPACYPTSQHEAHLEKALLAFHSM
VKGPAVQRFAKRLEEECKSIWNSGRQLCDAISLTGKPCMHQRHSTENGGSPLETMPKNHS
SGYVFLHACACGRSRRLRSDPFDFESANVTFNRFADCDNFLPIVQFPGVSMTEPIQPSSW
TLIRVGGAKYYDPSKGLLQSGFCLTQKFLLKWKISTRIRKTPIDFTDNIMLHGSLIKSLV
DSKVEPNVNVNTKMADVAQLKSRDLQSGIHNERNFTGNIKAEDKKSTSGRILPNFTLRKP
FSEVVAGSSGVDVRFPPLQQRKHSSSDIDKRIKQSKVVNSHERGYVTVDNLGSRNLENVI
KLSKNSNEISNNEHLDSNAFLQVGTNVVPMNANSLEKTKNPLLKQTLVYIGFEHECPHGH
RFLLNPDHLKELGSPFATIKESHTHAQGAACNMVDPLKYGKSDRHGKARDSVSVANATGS
SKQRSLDKLKDAVSGGSMYSDDQSNNIRRMTANNLTSVSATVSNSMKDLEKGVKSIGSED
NGSGFFMLNRDLPIFMNCPHCKLSKNEKDPPNVKFSGTISQLQRIFMVTPPFPIVLATHP
VIQFEESCLPPSVPERQQKLQFTFGCQLVLPPDSFLTLRLPFVYGVQLEDGSFHPLNPLQ
HQPEATAWIIGGTTLQILSKSGNLDEGSQT
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacccaattcctcctccgtccgagtacttatccgcccgccaccattatcaact
cccacttcctcttcctcttcaccttccccaactcctctccctcctcattctgcttcaccg
gaaccctctacttcatttcctccttcctcgccgttgccatcccttcctcgcttttccgac
accgtcgttgtcgtcggtttcattgggaggagacccgatgattcgattcaactcatcaat
cgggttattgattccaatgtctttggttccggtaaattggataagaaattagatgttgag
aaagaggaagttcgagaatggttcaagcggcgacgaattagttattaccacgaggaggaa
aggggcattctctttttgcaattttcttcccacaggagctccgtgtttgatgtggaagca
gattatgattcggagattcaggagcatgattttggcgatcttcagggaatgctttttatg
ttctctgtttgccatgtaatcatatatattcaggaggggtcgcggtttgatactagtatt
ttgaaaaagtttagagctttacaatctgctaagcatgttttaactccatttgtaaaatct
cgtgctacaccaccattgccatctagattgcagtcttcatctgcctcacggtctgttgct
tcagcacctgtgtctaataattcttctccaattagaagtggttctatcttaacacgcaat
gcttccggcatctctgtaatgtcgggtttaggttcttatacctcattgtttcctgggcag
tgtactccagtcatactttttattttcgttgatgacttcttagatggcccaatgattagt
tccaatgtggagggaatagatacagcatcacttaatcaatctccaagttcagacagtata
tctaggccaaatgtgccagttaaaggttctggatctgtagttgtgcttgcccgtcctgtg
agcaaatcagaaggtggtttcaggaagaaattgcagtcatctcttgaagcacaaattcgt
tttctaatcaagaaatgtcgaacgcttactggttctgacaccagtcatgctgggtctaga
ggtggaggcgcctcaagttctgcacctttgttttcacttgatgcatcaaaagctgttgtt
ctggtggataggtcaacaaataatacagctgagtctctggagtttgccacaagccttgtg
gaagatgttttgaatggaaaaactacatctgattctcttcttcttgaaagtcttggtcaa
agtgctagcaaagaggatatagtatctctaaaggaatttatttatcgacagtctgatatt
ctaaggggtagaggtggaatggttcatagtgcaagcagtggttcagctggtggggttggc
atggtcgctgttgcagctgctgcagctgcagcatctgttgcatctggaaaaacttttact
actcctgaactaccaagtatggaaatttggttgtcttcaagtcaacaaattctccagggg
attctctctgcaaaaggtggttgcatagatgaagtggaaattaataaacgaaaaccacgt
catcggcacattcattcttcatcgattgagggaaatgctttgaagggtatggatccttta
gatattgctgtatcttggttggaaagtggtaaaggtttaaatatgaagttttcaacttca
tggtgtgaaagagcattgccagctgcaaaagaggtttatctaagagaattacctgcgtgt
taccctacttcacagcatgaagcccacctggagaaggctttgcttgctttccattcaatg
gttaagggacctgcagtgcaacgtttcgcaaaaaggttggaggaagaatgcaaatccatt
tggaattctgggaggcagctgtgtgatgctattagtctgactggaaaaccatgtatgcat
cagagacacagcactgagaatggaggttcgcctttagaaaccatgccaaaaaaccattca
agtggatatgtcttcctacatgcttgtgcttgtggccgttcacgacgactacgatctgat
ccttttgattttgaatcagcaaatgttactttcaaccgatttgctgactgtgacaatttt
cttccaattgtacagttcccaggagtaagcatgacagaacccattcaaccatcatcatgg
actctgattcgagttggtggtgcaaagtactacgatccttcaaaaggtttactccagagt
ggattttgtctgactcaaaagttcctactcaaatggaaaattagtactcgaatcaggaag
actccaatcgattttacagataatataatgttgcatggttccttaattaagtcactcgta
gactctaaggttgaacctaatgtaaatgtaaacacaaagatggcagatgtagcacaactg
aagtcaagggatttacagtctggaatccataatgaaagaaatttcacaggtaacattaaa
gctgaagataaaaaaagcacaagcggtagaatccttcccaactttaccctgcgaaaacct
ttttctgaggttgtggctggatcatcaggtgtagatgttcgatttccacccctccagcag
aggaaacattcttcatcagatattgataagcgtatcaagcaaagtaaggttgttaatagt
catgaacgaggctatgttactgtcgataaccttggctcaaggaacttggaaaatgttatt
aagctttcaaaaaactcaaatgagattagcaacaatgagcatttagatagcaatgccttt
ctacaggtaggtactaatgtagttccgatgaatgccaatagtcttgaaaaaactaaaaac
cctcttctgaagcaaacacttgtatatattggctttgaacatgaatgccctcatgggcac
cgcttcctactaaatcctgaccatcttaaggaacttggatcgccttttgccacaattaaa
gaatctcatactcatgcgcaaggtgctgcatgcaatatggttgatcctctgaaatatggt
aaaagcgatcgtcatggtaaagctcgcgatagtgttagtgtagcaaatgctactggctca
agtaagcaaagaagtttagataagttaaaggatgcagttagcggtggtagcatgtattca
gatgaccagtcaaacaatattagaagaatgacagcaaacaatctgacatctgttagtgca
acggtctccaattctatgaaggacctagaaaaaggtgttaagtctattggcagtgaggac
aatggatctggtttcttcatgttgaaccgagacctaccaattttcatgaactgcccacat
tgcaagctctcaaagaatgagaaagatcccccaaatgttaagttctctggcacaatatct
caacttcaaaggattttcatggtgacacctccctttccaatagttttggctacccatcca
gtgatacaatttgaggagtcgtgtctgcccccttctgttccagaaaggcagcagaaacta
cagttcacatttggatgtcaactggtcttgccccccgatagttttctgacacttaggctt
ccatttgtctatggtgtgcaacttgaggatggaagtttccaccctcttaaccctcttcaa
catcaacctgaagcgactgcatggattattgggggcacaacattacagatcctgtcaaag
tctggcaatctagatgagggatctcaaacataa
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