Cucumis sativus (cucumber): 105436276
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Entry
105436276 CDS
T02486
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105436276
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105436276
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GFIT
Motif
Pfam:
Glyco_hydro_28
Glyco_transf_20
Motif
Other DBs
NCBI-GeneID:
105436276
NCBI-ProteinID:
XP_031745102
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All DBs
Position
7:complement(18623890..18626097)
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AA seq
458 aa
AA seq
DB search
MTRNFSLIQILLLVFAWECCARAAAIFIDTINTQILLNGIVPKVNEQFLRPAEAPWHLGF
STLPNIGGGTVNDIKVNVDLNENGGLVFDVTKHGAKADGETDDAQAFMTTWIAACRNTVG
PAKFLIPQDIFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSSEWFSIEDVTGFIL
TGSGVFDGQGVSVWTYNDCIKNNLCQLLPISIKFSRLNHTIIDGLTSINSMGFHTSVFYC
YNFTATNMKITAPHNSPNTDGMHLSTSKLVTISNSIIGTGDDCVSIGHSTENIIITNVTC
GPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTFASPIPGLASRIVFEDIVM
YNVKNPIIIDQTYGTEEGKESNWKVSDILFKNIRGTSTTNVAVLLECSKLFPCEGVELRD
INLTYGGTDLRNTTVVSSCSNAKIATFGVQNPPPCDRV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaattttagcctcattcaaatccttctgttagtatttgcctgggaatgctgt
gcaagggctgctgccattttcattgacaccatcaacactcaaattcttctcaacgggatt
gtaccaaaggtaaatgagcagtttcttcgtcctgcagaagcaccctggcatcttggcttc
agtactcttcccaacattggcggcggcacggtgaatgacattaaggtaaatgttgatcta
aatgagaatggtgggttagtttttgatgttacaaaacatggagctaaagctgacggagag
actgatgatgcacaggcattcatgacaacatggattgcagcttgccggaacacagtcggt
ccggcgaagttcttgatcccacaagacatatttctggtgggtccggtgactttcgccggt
ccgtgcaaaagctttccaatcactctcgaaaatcaaggaactgtaaaggccacaaccgat
attagtgcatattcttcttcagaatggttctctattgaagatgttactggtttcatcctc
accggctccggcgtctttgacggccaaggcgtctccgtttggacctataatgactgcata
aaaaacaacttatgccaacttcttccaatctcgattaaattctcgagattaaatcacacg
ataattgatgggctcacttcgataaacagcatggggtttcacacgtcagtattctactgc
tacaattttactgctactaacatgaaaattacagctccacataatagtcccaacactgat
ggaatgcaccttagcacctccaagttggtcaccattagcaacagtatcattggcaccggt
gatgattgtgtctctattggccacagtactgagaatatcatcatcaccaatgtcacttgc
ggccctggtcatggtcttagtgtgggcagcttgggcaagtactcgaaagaaaagggtgtc
tacgacgttctagtaaagaactgcactattttcaatgccaccaatggtgccagaattaag
acatttgctagccctatcccggggttagcctcgagaatagtctttgaagacattgtaatg
tacaacgtaaaaaatcctataattatcgatcaaacctacggcactgaggaggggaaggaa
tcaaattggaaggttagcgacatactcttcaagaacattcgaggaacatcaacaacgaat
gtggcagtgttgttggaatgcagcaagttgtttccatgcgaaggggtggagttgagggac
attaacttgacttatggaggcaccgacttgagaaatacgaccgttgtttcttcatgttcg
aatgcaaagattgctacttttggggttcaaaacccgccaccttgtgatagagtataa
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