Cucumis sativus (cucumber): 116401617
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Entry
116401617 CDS
T02486
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
csv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116401617
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116401617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
116401617
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
116401617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116401617
NCBI-ProteinID:
XP_031744545
LinkDB
All DBs
Position
7:6652230..6657882
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AA seq
721 aa
AA seq
DB search
MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS
DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP
DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPQQQQQQPQ
PQPQPQPQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGG
GGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGG
NSIATGGNYQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGF
GQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVG
LPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESS
YGEEAGSDQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEK
DPGPDHDWPDRRPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYK
DDRDKYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTS
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggagagggtgggttcggtgagggtgtggatcagattgatcagttccatcgg
aacgaggccatttcggccgttgctgatgatggtttcttgggcgaagacgaggatgaatac
gaggacctgtataacgatgttaatgttggggaggggttccttcagtcgttgaggaagagc
gatgatttgggattcaagagggaggaggaacccaagatggagcctcctgcacctgtacca
cccagttccgctgcttccatacctggtattggtggaggtgcgactgaagttactggttta
ggagatgccggtgggcgtactgtttcggagagagtaacagagggttacaatcagattcca
gatttaagaacgaatgagatggctatcagaggtggggtgggatcggggccgcctgtaggc
acaggagttgggatcagagttgaattagggcaagggagcaaagccatcgagttggaggag
cgaagtagtaataacgtagctgggcatcaggctccgcaacagcaacagcaacagccacag
ccacagccgcagccgcagccacagccacagccgcagcaccatcaccaaccacctcagagc
ggagtcttaggaaatcctgggagtgtagaaaatgaaggtttgctaaggcaaggtggtgga
gttaatgtcaatggggttggtggaaacgggtttggtaatatcgggagtgcagggggaggt
ggcggtggaacaattttgtttgttggggatttacattggtggactacagatgcggagctt
gaggtggaactctgcaagtatggtccgttgaaggaggtcaagttttatgacgagaaagcc
agtggaaaatcaaaaggctactgccaggttgagttttatgatccttctgctgccacagct
tgcaaggagggaatgaatggccatatttttaatggacgtccatgtgtagttgcatatgca
tcaccgtttagtgttaagaagatgggagaagcccaagttagcaggaaccagcagatagcc
caagctactaatcctcaagcaaggagagcgcctaacgaggctgtaggtaaaattggtgga
aatagtattgcaacgggtggtaactatcaaggtggtgataacaatagaggttctgggaga
ggtaattggggaaggagtaatgctcatggaatgggtggtcgaggaccagctggccaaatg
aggggtaggggtggtgggatgggtggcagaggtataatgggaaatggtggaaatggcttt
ggccaaggtattggtgctacccctcctttattgcatccccagtcaatgatgggtcaaggt
tttgatccatcttttggtgcacccatgggaagaatgggtacatatggtggttttcctgga
gccccggctccccctttctctggaattttgtcatcctttcctcccgtcgggggtgttggc
cttcctggtgtagctcctcatgtgaacccagcattttttggaagaggtatgcctatgaat
ggaatggggatgatgccaacatcgggcgttgatgggcctaatatgggaatgtggtctgat
cctagtatgggtggatggggcagtgaagagcaaggaggagggagagcaggtgagtctagt
tatggagaagaagctggttctgaccagcattatggtgaaggcagtcatgaaagagggcca
tgggcaaattctgcgaaggagaaagatagaggctctgaaagggactggtcacagtcttct
gatagaaggtatcgagatgatagagatgttggttatgatagagagagatccaaagaaaaa
gatccgggacctgaccatgactggccagatagaaggcctcgtgaagatagagatataggg
cgtgaaagggataaagatagggatcgagagagggatagagaacgatcccgagattatgag
cgtggccatcatgaacgtgatcgtgaacgtgaaagggatcgtgaccgtgataggtacaag
gacgacagggacaaatattcagatcatcataggtacagagaccgggaaccagagcatgat
gaggattgggaaaggggacggtcatcaaggactcatagcaagtcccgattatcgcaagaa
gaagaaaatcgttctagatcaagggatgctgattatgggaaaaggcggaggcttacttct
gaatag
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