Cucumis sativus (cucumber): 116403556
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Entry
116403556 CDS
T02486
Name
(RefSeq) protein argonaute 5-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
116403556
03036 Chromosome and associated proteins [BR:
csv03036
]
116403556
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116403556
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116403556
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
116403556
microRNA pathway
RISC loading complex
116403556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
116403556
NCBI-ProteinID:
XP_031740719
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All DBs
Position
4:13093904..13101256
Genome browser
AA seq
989 aa
AA seq
DB search
MSRRGGGGSGGGGGRGSGGRGGQPSPAISRGGRGGRGGRGGRGGREGGGRDGGRVGYPAT
QQFHSPTPQPTPVVSPPPRPTPVASAPPPQTSTGASSASSSGTATLLQPEVSQIEAQVEK
VTPTPQNVPPSSSKDLTVAKRPGYGTAGRKVVVRANHFLVQVADKDLHHYDVSITPEVTS
KRVCRDIVNQLANTYRESHLGGRYLAYDGGKGVYAAGQLPFSSKEFMIKLVRKDGAGSSQ
PTRKEREFKVSIKFASKPDLHHLQQFIHRQQRDAPQETIQVLDVVLRTKPSVDYTVVGRS
FFSHELGQPGELGNGVEYWRGYYQSLRPVQMGLSLNIDVSARSFYEPISVTEYVVKHFNL
RILSKPMSDQDCRKIKKVLRGVKVGLMCREHARTYKITGISSEPVNRLMFTLDDQKTRVS
VAQYFHEKYGVALKYPFLPAIQAGNDAKPVYLPMEVCKIVAGQRYTKKLNERQVTQMLRA
TCQRPPNRADSIGKMIGKIDHSKDDIVNDFGIVVSSRLCDVGARVLPSPMLKYHDTGKES
RVDPRMGQWNMINKKMINGGRVDYWGCVNFSSRLDPGLPSEFCHQLVSMCNSKGMVFNPT
PLFPVRNAHANQIDGALRDIHSQSLKSLGPQGKSLQLLIIILPDISGSYGKIKRICETEL
GIVSQCCQPRQAQKLNKQYFENVALKINVKVGGRNNALNDAIQRKIPLVSDRPTIIFGAD
VTHPQPGEDSSPSIAAVVASMDWPEVTKYRGIVSAQGHRDEIIQDLYREDKDPQKGLVCA
GMIRELFIAFRRSTNLKPHRIIFYRDGVSEGQFSQVLFYEVDAIRKACASLEEGYQPPIT
FVVVQKRHHTRLFPISGADTDRSGNILPGTVVDTNICHPTEFDFYLNSHAGIQGTSRPTH
YHVLYDENKFTADAMQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDSSDS
GSTSSGGGNVDIQRLPSIKENVKDVMFYC
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgaggcgggggcggtagtggcggcggtggtggtcgtggttcgggtggtcgt
ggtggacagccctctccggctatatctcgcggtggaagaggtggaagaggtggacgaggt
ggacgaggcggacgagagggtggagggagagatggaggcagggtaggttatccagccact
cagcaattccattctccgactcctcagcctactccggttgtttctcctcctcctcggcct
actccggttgcttccgctcctcctccccagacgtcaacgggagcatcttctgcttcctca
tcgggaactgctacgctcttacagcctgaggtttctcagatcgaagcacaagtggagaag
gtgacaccgacgccgcagaacgttccgccgtcttcatcgaaagacttgactgtggcgaag
aggccgggatatggaaccgctggtcgaaaagttgttgttcgtgccaatcatttcctggtt
caagttgcagacaaagatctccaccattacgatgtttcaatcacacctgaggttacatcc
aaaagggtctgccgagatatagtaaaccagcttgcaaatacgtatagagaatctcattta
ggtggaagatatctagcatatgatggaggaaaaggtgtttatgctgctggtcaacttcca
ttttcgtccaaagagttcatgattaaattagtccgtaaagatggtgctgggtcttctcaa
ccaacaaggaaagaacgagagttcaaagtatctatcaaatttgcctccaaaccagacctc
catcatctacaacagtttatacatagacagcagcgagatgcaccacaggagactatacaa
gttcttgatgttgttttgagaacaaaaccatctgtcgattacacagttgttggaaggtca
tttttctcgcatgaactggggcagccaggtgaacttggtaatggtgttgagtattggagg
ggatattaccaaagtctacgacctgtacaaatgggtttatctttaaatatagatgtgtca
gctagatcattttatgaaccaattagtgtgacagaatatgttgttaaacacttcaaccta
aggattctctcaaagccaatgtctgatcaggattgtcgcaagatcaaaaaggtacttaga
ggagtgaaggttggattaatgtgtagggagcatgccaggacctacaagattactgggata
tcatcagagcctgttaatagattaatgtttactcttgatgatcagaaaacccgagtctct
gttgcacagtactttcatgaaaaatatggcgtggcactcaaatatccatttctaccagct
atacaagctggtaatgatgccaagccggtttatttgcctatggaggtttgtaagattgtt
gctgggcagagatataccaaaaaattgaatgaacgccaagtaactcagatgctaagagcg
acttgtcagagacctccgaacagggcagatagtatagggaagatgattggtaagattgat
cattctaaagatgacattgtcaatgattttggcattgttgtatcatcaaggttatgtgat
gtgggtgctcgtgttttaccgtccccgatgctaaaatatcatgatactggcaaagaatca
cgagttgatccaaggatgggtcagtggaatatgattaacaagaaaatgatcaatggtggt
agagttgattattggggctgtgtgaacttctcttcacggttggatccaggcttgccatct
gaattttgccatcagttggttagcatgtgcaatagcaaaggaatggttttcaaccctaca
ccgctgtttcctgtacgtaatgcacatgcaaaccaaatagatggtgcacttagagacatt
catagccagtctttaaaaagtttgggaccccagggcaaatctcttcagttgctcataatt
attttacctgatatttctggttcctatgggaagatcaaaaggatatgtgagactgagctt
ggaattgtttcacaatgttgccaacctaggcaagcacaaaagctgaacaagcagtacttt
gaaaatgtggcccttaaaattaacgttaaggttgggggaagaaacaatgccctaaatgat
gctattcagcggaaaattccacttgtttcagatcggcctacaataatctttggagcagat
gtaacacacccacaacctggagaggactccagtccttcaatagcagctgttgttgcctca
atggactggcccgaggtaacgaagtatagaggaattgtttcagctcagggccaccgggat
gaaattatacaagatttgtacagagaagataaagatcctcaaaaagggttggtgtgtgca
ggaatgatcagggagctgttcattgcttttagaaggtcaacaaatctgaaaccgcacaga
ataatattttacagagatggtgtaagtgaaggacagttctcacaagttttattttatgag
gtggatgcaattaggaaggcatgtgcctctcttgaagagggttaccagcctccgattacc
tttgttgtggtgcaaaagagacatcatacccgtcttttccctatcagcggtgcggatact
gatcggagtggaaacatccttccaggtactgttgttgacaccaatatttgccatccaact
gaatttgatttctatttaaacagtcatgccggcattcaggggacgagtaggccaacacat
tatcacgttttgtatgatgaaaacaaattcactgccgatgcaatgcagatgcttactaat
aatctttgctacacgtatgcaaggtgcactcggtcagtttccattgttccaccagcatac
tatgcacatcttgcagcctttcgtgcccgttattacatagagggtgattcatctgacagc
ggttccacaagttcaggtggtgggaatgtagatattcaacggctgccgagcataaaagaa
aatgtgaaggatgtgatgttttactgttga
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