Cucumis sativus (cucumber): 116403816
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Entry
116403816 CDS
T02486
Name
(RefSeq) protein CHROMATIN REMODELING 19-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
116403816
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116403816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
116403816
NCBI-ProteinID:
XP_031741288
LinkDB
All DBs
Position
5:8441970..8473606
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AA seq
741 aa
AA seq
DB search
MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV
MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL
EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAAC
KAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGGAILADEMGLGKTIQAITYLVMLKYLNND
SGPHLIVCPASVLENWERELKKWCPSFSVLHYHGAARSAYAKELNSLAKSGLPPPFNVLL
VCYSLFERHSSQQKDERKILKRWQWSCVLMDEAHALKDRNSYRWKNLMSLARNAKQRLML
TGTPLQNDLHELWSLLEFMMPNLFATEDVDLKKLLTAENNSLINHMKFILGPFILRRLKS
DVMQQLVPKIQQVRYVAMEKQQEDAYKDAIDDYRNASRGRVGRNGNTNSDNIYNILPRRQ
ISNYFVQFRKIANHPLLVRRIYKDEDVTRFAKKLHPLGAFGFECTVERVAEELKSYNDFS
IHRLLLSYGITDRKGVLSDNEVLLSAKCRELAQLLPSLKRDGHRVLIFSQWTSMLDILEW
TLDVIGFTYRRLDGSTQVAERQTIVDTFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHD
MDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLVLDAAVLESGIEM
DNERESSEKTMGEILSAILLG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtcttcgaagaaatttccgacgaagagtggtccaatcactccttcaagccc
tctcgcgtcttcacaaaaccacagactgaaccttcgatccctcctccgattgaatctttc
gcataccgaccccaccagctctatatttccgacgagagtagcgacgattgtgtcgtagtc
atggaaagttccaaaaattatgaggaaaatttggaggacgaggatgtcgaggttgaggga
gtgaaatccaccacggcagtgagtcgtggccgtcggtttgtggttgatgacgaagatgat
gaaagtgagagggaattgactgaggtttgtgatgtaaagtcgacgagcgaggaggagctg
gaggagggtagggaggatgacgatgatgtcgtcggtaaggctttgcagaagtgtgcaaaa
ttatctgccgagttgaagagagagctgtacggctcttcggtttctgcctctgaacgatat
tcagaagtggagtcttcttccgttaggatagtcacccaggatgatattaatgcggcttgc
aaggctgaagattctgattttgagcctgttctcaagccatatcagctggttggcgtgaac
tttcttcttcttttgtatcagaagggagttggtggagctatacttgcagatgagatgggt
ctggggaagacaatacaagctataacataccttgtgatgttgaaatatttgaacaatgat
tcggggcctcacctaattgtatgccctgcatctgttctggagaattgggaaagagaactc
aaaaagtggtgcccatccttttctgtactccactatcatggggccgcccggtcggcatat
gctaaggaattgaattctctggctaagtcagggttgcctcctccgtttaatgttcttctt
gtttgttattctctctttgaaagacacagttcccagcaaaaagatgaacgtaaaatcctg
aaacgctggcaatggagttgtgttcttatggatgaggctcatgccttgaaagatagaaac
agctatcggtggaaaaatttaatgtctcttgcacgtaatgcaaagcaacgattaatgttg
acagggacaccgcttcaaaatgatttgcatgagctgtggtcactgttggagtttatgatg
cccaatctcttcgctactgaggatgtggacttgaaaaaactattaacagctgagaataat
tcattgattaatcatatgaaattcattttgggtccatttattttgagacggttaaaatct
gatgttatgcagcaacttgttccaaagatacagcaggttcggtatgttgcaatggaaaaa
caacaagaagatgcctacaaggatgctattgatgattatcgaaatgcttctcgcggccgc
gttggtagaaatggcaatactaattcagataacatatacaatattcttccccgtcgtcag
atatctaattattttgttcagttccgcaagattgctaatcatcctttactagtacggcgc
atttacaaagacgaggatgttacccgttttgctaaaaagttacaccctttaggtgcattt
ggattcgagtgtaccgtggaaagggtagctgaggaacttaaaagttataatgatttttcc
attcaccggttattactttcttatggcattactgacagaaagggagttctatcagataac
gaagtgctactttcggcgaagtgtcgggaattagcacaactacttccttcactgaagcga
gatggacatcgagttcttattttcagtcaatggacttcaatgcttgacatcctagaatgg
acattggatgtgattgggtttacttatagacgactagatggaagtacgcaggtagcagaa
agacagacgatagttgacactttcaataatgacacgtctatatttgcatgcttgctttct
actagagcagggggacaggggttgaacttaactggggccgacactgttgtcattcacgac
atggatttcaatccacagattgaccgccaagcagaagatcgttgtcatcgaattggccaa
accaaacctgtcactatatacaggttggtgacgaagggaacggtggatgaaaatgtctat
gagatagcaaaacggaagttagtccttgatgctgcagttctggagtcgggtatagagatg
gataacgagagggagtcatctgagaagaccatgggggagatattatcagcaattcttctt
ggttag
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