Cucumis sativus (cucumber): 116404421
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Entry
116404421 CDS
T02486
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
116404421
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116404421
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
116404421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-RING-like
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
116404421
NCBI-ProteinID:
XP_031742649
LinkDB
All DBs
Position
6:complement(14359899..14361363)
Genome browser
AA seq
410 aa
AA seq
DB search
LFFFFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQ
AHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPK
CKHAFHIGCIDHWLEKHSSCPICRCRIGVEDIAFFKSNSIRLIRNNSRPELPQDSRIELF
VQREENHHNSSRSNNGTSFRNIGKGNKEKEVLIENEAGECESEERVLFHKHKHKILVSDF
VFMNRWSNLSSSDLVFLNTEMLGVMSSNRFSSLDSESISQSATREKEGKKTSQIKEEMEM
KRSFERRISIAEKNSLVSISGISSTSSDPNASTSRTTILNERRSVSDTTAFSRFGYFNEN
ATRDSSMIEADAKSFRIRQLWLPIARRTVQWFANREQRFRLSKYTQQPDA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ctatttttcttttttcctgtcattgcacaagcaccttctccaccaaaagcgggttctggt
attccacaaaacttcaccattgttattggaatcctctccatcatgttctccatggtcttc
atccttgttgtttatgcaaaattctgtcacccgacttcccattttcgtggcgaaccgcaa
gctcatctcgggcatggacttctcagatcagactcaagattttctggggttgatcaaaag
gtgattgatgcacttcctttctttagattctcatcactcaaaggatcaagggaagggctg
gaatgtgctgtttgcttatccaaatttgaggacattgaagtccttcggttgcttccgaaa
tgcaagcatgcctttcacattggctgtattgaccattggctcgaaaagcactcgagctgt
cccatttgtcggtgtaggataggtgtcgaggacattgcattctttaaatctaacagtata
agactaatcaggaacaacagccggccagagctgccacaagattcacgcatagagctcttc
gtgcagagagaggaaaatcatcataactcttcaaggtccaacaacggaaccagcttcagg
aacataggaaaaggtaacaaggaaaaagaagtattgatcgaaaatgaagctggtgaatgc
gaaagtgaggagcgagtgctttttcacaagcataaacacaagattcttgtatctgacttt
gttttcatgaacagatggagcaacttgagttcttctgaccttgtgttcttgaacacagaa
atgcttggggtcatgtccagcaatagattctcttctttagattcagaaagcattagccaa
tcagcaacaagagaaaaagaaggcaaaaagacttcacaaattaaggaggagatggaaatg
aagagatcattcgagaggaggataagcatagctgagaaaaatagcttagtttcaatctca
ggcatttcttctacatcatcagatcctaatgcaagtacatcaaggacaacaattcttaat
gaaagaagatctgtctcagacaccactgctttttcaagatttggttattttaatgagaat
gcaacaagagacagttctatgattgaagctgatgcaaaaagtttcagaattaggcagcta
tggttgccaatagctagaagaacagtgcaatggtttgccaatagggaacaaaggtttcga
ctgtcaaagtacacacagcagccagatgcatag
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