Cucumis sativus (cucumber): 116404475
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Entry
116404475 CDS
T02486
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116404475
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
116404475
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
TPS
ADNP_N
Motif
Other DBs
NCBI-GeneID:
116404475
NCBI-ProteinID:
XP_031742832
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Position
6:22560898..22562781
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AA seq
419 aa
AA seq
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MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA
ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL
ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS
KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN
KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP
ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI
VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggattgatatcaaacgttgtggcattattgccattgttgttattgttggtgtctaat
tctaaagctcaacctgctgcagctcaaccttcagctcaaccagctcaacctgcaggtggt
gctggtggtgttttcgatatcacaaaatacggtgccaaacctaatgcagatataactgcg
gctttgacaagtgcatggaaggaggcgtgtgcatcgaccactccaagtaaagttttgatt
ccaaaaggaagttacggattaagtcaatccaacctcaaaggcccttgtaaaagtcctatc
gaactacaaatcgaagggacattacaagctccggcccatccagaaggagaagggctactc
attttggaaaataccgatctgttgacagtgtcaggtactggagttttggatggccaagga
aaagcaggttgggaaaagaatgattgccatttgaagaaagaatgcaccaagcttcccatg
aatttgaagctcaatttcatcacaaattcaatagtaacgggcataacgtcattggatagc
aagaattttcatattaatcttttgggttgcaagaaccttacctttgaccacgtgacaatt
actgcaccgggcaatagtcccaacaccgatggaattcacgtgagtagttcagaacagatt
aacattctcaataccaatatcgcaaccggagatgattgcatatctgtgggagactccaac
aaacaagtagctattagcgatgttacttgcggaccaggacatggaattagcataggaagt
ttgggaaaatataccaaggaaaaagaagtggtaggagttacggtgaaaaaatgcaaattg
accggtactacaaacggtgttaggatcaaaacatggccagattctgccgtcgcatttcca
gccacagacatgcattttgaagatatagaaatggataatgtcagtaaccctatcatcata
gaccaagaatattgtccatggaaccaatgcaaccgaaaggttgcatcaaaaattaagatc
agcaatgtaagcttcaagaatattagaggcacgtctgcaactgcgattgcagtcaaaatt
gtttgcagtaagagtattccatgtgagggagtggaaattgctgatattgacctcacttat
agtggaccagaaggtccaattaagtctcagtgtgcaaatgtgaaacccgtcattacagga
aaacaaaatcctccaatctgtggtgaagttgcaccagctgatggtccatcaaccgattga
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