Cucumis sativus (cucumber): 116405487
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Entry
116405487 CDS
T02486
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116405487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csv03032
]
116405487
03400 DNA repair and recombination proteins [BR:
csv03400
]
116405487
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
116405487
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
116405487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
RTT107_BRCT_5
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
116405487
NCBI-ProteinID:
XP_031745331
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
AQLPFTKPFSHSHSQSFIPPISHKILSLVGLPSTQKVIEATLQLLKPKPFAGANVFVSRN
LVASEMFDPFHDALKQNGAEVFLCCDPSQNAPNDYHVISSADHAKFEDLRAKGCNLLGPQ
CVMSCAKEHRPLPQQGYTCCLAMDGVKILASGFQEDEKVEIGKLVSAMGGVLHTKASLDV
SFVIVKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRVLPFSGLNISVSGI
PAGELKEMAKLILQNGGRYSADLTRKCTHLICDAPEGDKYKVARTWGRINIVTWKWFDQS
IARKGCLNEDLYRVGSVSGTXNKLTRVCLTAHNGQEKVIVNSAVPSSFLADSKFTAVAGP
WFSDMDVEVTLSQSTPMFSDASHFINEVDVEVPVAMGRNEENTVNYLANDFPSEENDLYL
SACRIKVVGFEASEMQKIVNMILRGGGFRYMLFNDKLTHIIAXWLEDCDRQKKEIPILGR
HMAYDELIPKASSKMSTIVMDRNKVPNVHPIVPSNVSEGNIHVNIGKTSIAVERIEEKSE
WRQENEIIPEKPTMCSKWYKQESRKDGARAEIVEWINQGGGEVVEDHMKQKVHFTVECHG
GIPRSTDVHSTYVSSHWVQSCLEDGCLWDTNGHILYSPLPCCVPLPGFENIRFCVSQYDD
KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
RKIVSLDLYRPKEVTAQDRVTCLCTVSQFPTQAAPMIANESVSQFPIHSAILRDQSAGTN
SSSIGAAERISSTKRRRKLFDEAIQKRSVFVGNSSTQSDCNLNSTKQTTSKSSVVTSHVP
DVASAIEDLLEQTTKIQDQKSPGKTGCDKSVSFY
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
gctcaacttcctttcacaaaacccttcagccattcacactctcaatctttcatccctcca
atttctcacaaaatcctctctctcgtcggacttccatcgacacagaaagtaatcgaagca
actctccaacttctgaagcccaaaccatttgctggagctaatgtgttcgtctctcgtaat
cttgtcgcttcggagatgttcgatccttttcacgacgctctcaagcagaatggggctgag
gttttcctctgttgcgatccctctcaaaacgcccctaacgactatcatgttatctcctcc
gccgatcacgcaaagttcgaggatcttcgcgccaagggatgcaacttgttaggtcctcag
tgcgtgatgtcatgtgcaaaagagcacagacctcttcctcaacagggttatacttgctgc
cttgccatggatggtgtgaaaatcttggcatccggttttcaggaagatgaaaaggttgag
atagggaagttagttagtgcaatggggggagtattgcatacgaaagcatcactagatgtc
agttttgttatcgtgaagaatgctttggctgcgaaatacaagtgggcactaaacatttca
aagaaaccaatcgtgtcattttcttggttacaacaatgctggattgaacatcgtgttgtg
cctcaggagggatatcgggtccttccattttctggattgaatatttcggtatctggaatt
cctgcaggtgagctcaaggagatggcaaagcttatcttgcaaaatggtggaagatattct
gccgatctcacaagaaagtgtacacatttgatatgtgatgctcctgaaggtgacaagtac
aaggttgcacgaacgtggggccgtatcaatattgttacttggaaatggtttgatcagtcc
atagccagaaaaggatgtcttaatgaggatttgtaccgtgttggtagcgtttctggaact
taaaataaattgacaagggtttgcttgactgctcacaatggccaagaaaaggttattgtg
aactcagctgtaccgtcctcatttcttgccgattcaaaattcacagcagttgctggtcct
tggttttcagacatggatgttgaagttactctttcacagagcacgcctatgttttcagat
gcttctcattttataaatgaggttgatgttgaagtgccagtcgcgatgggaaggaatgaa
gaaaacactgttaattaccttgcaaatgactttccgtctgaagaaaacgacctatatttg
tcagcatgtagaataaaagttgttgggtttgaagcttctgagatgcagaagattgtaaat
atgattctcagaggtggaggcttccgatacatgttgttcaatgacaaattaacacacata
atagcanactggcttgaagattgtgatcgtcagaagaaggagatccctattcttggtaga
cacatggcatatgatgaacttattcctaaagcatctagtaaaatgagcaccattgttatg
gatcggaataaagttccaaatgttcatccaatcgtgccatcaaatgtgtcagaaggaaat
attcatgttaacattggaaagacgtcaatagcagtggaaagaattgaagaaaaaagtgaa
tggagacaggaaaatgaaattatcccagaaaagccaacaatgtgtagcaaatggtacaaa
caagagtcaagaaaagatggggcgagagctgaaattgttgaatggataaatcaaggggga
ggcgaggttgttgaagatcacatgaagcagaaagtgcacttcactgttgaatgtcatggt
gggataccaaggagtacagacgttcatagtacttacgtgtcaagtcattgggttcaatca
tgtttagaggatggatgtttgtgggataccaatgggcacattctctattctcctcttcct
tgttgtgtccctttgcctggatttgaaaacatacggttttgtgtttcacaatatgatgat
aaagacagagtattgttaagaaatctgtgttttgtacttggggccaagtttgtggagaag
ctgacaaagaaggtaacccatctaatatgcaagttcacggatgggacaaagtatgaggct
gcttgtaaatgggggaaacaatgcattacagctgaatggatatatgagtgtgtcagacaa
agaaagattgtttctcttgatttgtatcgcccaaaagaagttacagctcaagacagagtg
acatgcttgtgcactgtcagccaatttcctactcaagctgccccaatgatagccaatgaa
agcgtatcccagtttcctatccattctgccattctgagagaccaatcagctggaactaac
agtagctctataggagcagctgaacgaataagttctactaaaagaaggcgcaagttattt
gacgaagccatacaaaagcgttcagtttttgttggaaacagttccactcaatctgactgc
aatttgaattccacaaaacaaactacatcaaaatcttctgtagtaacttcacacgttcct
gatgtcgcttccgcaatcgaggacttgttggagcagacaactaagattcaagatcagaag
tcacctggaaagactggctgcgacaaaagtgtatccttctattag
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