Cucumis sativus (cucumber): 116405900
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Entry
116405900 CDS
T02486
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 11-like
KO
K24260
WD repeat-containing protein 11
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
116405900
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csv03037
]
116405900
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Others
Others
116405900
Cilium and associated proteins [BR:
csv03037
]
Other cilia and associated proteins
Other cilium assembly proteins
116405900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
ANAPC4_WD40
TPR_GEMI5
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
116405900
NCBI-ProteinID:
XP_031745524
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MTSPRLSGPPPLPIHSSTQHHDSWDCMLPGPPSRNNFGSADISPSGLLAFPSGSSVSIVD
SRSMQLITAIPMPPPSTTATSLSPFVTSVRWTPLPLHRDLLSTEPSTSHLHLAAADRQGR
IALLDFRLKSPTIWFDTSDYKYGVQDLCWVRSGPDSYLLAAIHGASALSLYSVTTARCVW
KYDASPEYLSCIRYDPFDSRHFCXIGLKGFLLSVQVLGXKESDVVIKELRIGTDCTELLK
LERDAASGSSSPASAMFPLYNAKFAFSPKWRHILFVTFPRELVVFDLQYETALFLVSLPR
GCGKFLDVLPDPDSELLYCPHLDGRLSTWRPKRVGTRLTRDELIYYTYRGEQVHVMSAME
ELLPSIGTSVPSPSVLAVVICQSDSILQNVAKLCSDVRHSHSPSPDADAEAEAEAEADIV
SPFDSYDECHPISSTHLISISDDGKVWNWLVTAEDTQTDDACVSMSTDVGGVPTSDSNTD
QIVSSTNSLASEAGKQLDHANTSCGRPPSGLSELDLSFKISLVGQLQLLSSAVTMLAVPS
PSLIATLARGGNYPAVAVPLVALGTQSGTIDVIDISANSVSSSFSVHNSVVRGLRWLGNS
RLVSFSYSQVNEKSGGYLNRLVVTCLRSGFNRTFRVMQKPERAPXRALRASSSGRYLLIL
FRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRPAKERTTMTSDTVSSPTKASLSD
TSKLAQEGNQEETSESFAFALVNGALGVXEVHGRRIRDFTPKWPSSSFVSSDGLITAMAY
RLPHVVMGDRSGXIRWWDVTTGHSSSFNTHREGIXRIKFSPVVPGDHSRGRIAVLFYDNT
FSIFDLDSQDPLANSILQHQFPGTLVLELDWLPLRTDRKDPLVLCIAGADSSFRLVEIII
NEKKHGYGRKTAKERFRPMPICSPLLLPTPHALALRMILQLGVKPSWLKKKPQLVSGVSG
GGHDLRSHMIDLPPVGDSVVPEMLLKVLEPYRIEGCILDDARAKLYSKLVHKGXPLRFAF
AAAIFGESSEALFWLQLPSALSHLMNKLANKSPREVNPQCLMDLDEASMLNRITSKGKSM
PRTGKKETLGQGQLXAMAFKQEELWESANERIPWHERLDGEEVIQTLLHGRETYLTAQLV
NVGFWVCVYLLGGSIEGVLGINSIVHFNVSLGVVIIVSKHGPHPFEWTTLGVNSTFRNPW
KDISFELPSFSQFSCCFVGMEFGVSFVGLRVRQSNGQGVPPPCAFKRLGGFFVACHGRIQ
SVTLVYLTIFVVRLVSVGNLEAAVSLLLSTSPESSYFYANALRAVALSSAVSRSLLELAV
KVVAANMVRTDRSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLKGSDYARVLL
RWANHVFHSEHNIWRALILYVAAGALQEALAALRESQQPDTAAMFILACREIHAEFISNL
ENSDDESDSNALKNKLLKLPGWTLKMMTLSQSVNIMDNTRENLCTSAWTPCRILIEEWNN
FSPCRDVINQFSRDLPFIELHP
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgactagcccccggttgtcggggccgccgcctcttccgattcactcctccacacaacac
catgactcctgggactgcatgcttccgggccctcccagtcgcaacaacttcggatccgcc
gacatcagcccctccggtctcctcgctttcccctccggcagctccgtctccatcgttgat
tctcgttctatgcagctcatcaccgccatccccatgcctccgccgtcgactactgctact
tctctctcccctttcgtcacctctgttcggtggactcctctccctctccaccgtgacctc
ctttctacagagccctccacctcacaccttcatctcgctgctgctgatcgccaaggtcgc
attgctcttcttgatttccgtttgaagtcccctaccatctggttcgatactagcgactac
aagtacggtgttcaggatctgtgttgggtgcggtctggacccgattcgtaccttcttgct
gcaattcacggcgcctcggctctctccctctatagtgttaccactgctcgatgtgtctgg
aaatatgatgcttcccctgaatatctgtcttgcattcgttacgatcccttcgattcgcgc
catttttgtnnaattggtctcaaagggtttcttctctcggttcaggttttggggnagaag
gaaagtgatgttgtcattaaggagctgcggattggaaccgactgcaccgaattgctgaag
ctagaaagggatgcagcttccggatcatcgtcgccggcctctgccatgtttcccctttac
aatgcgaaatttgcattttcgccgaaatggaggcatattctgtttgtaacgtttcccagg
gagttggtggtgtttgacttgcagtatgagacggcgctttttttagtatcattgcctcgt
gggtgtggtaaattccttgatgtgctaccggatccggacagtgagttgctctactgtcct
cacctggatggaaggctcagtacctggcgcccgaaaagagtaggaactagacttacaaga
gacgaacttatatattatacttacagaggtgaacaagtccacgtaatgtctgcaatggaa
gagttgctgccgtcaattggcacatctgttccatctccttcagttcttgctgttgtcatc
tgccagtccgattccatcctccaaaatgttgccaagctttgttctgatgtacgtcattct
cattctccttctcctgatgcagatgcagaagcagaagcagaagcagaagcagatattgtt
tctccatttgattcatatgacgaatgccatcccatctcttcaacacacttgatatccatc
tctgatgatggaaaagtatggaactggcttgtaactgccgaagacacgcagacggatgat
gcatgcgtgagtatgagcactgatgtcggtggcgtgccaacttcagacagcaacactgac
caaatagtttcttctaccaattcacttgcttcagaagcaggcaagcaactagatcacgcc
aataccagttgtggccgtccaccctctggcctcagtgaattggacttgtcatttaagatc
agtttagttggtcagcttcagcttctttcttctgcagtaacgatgctggcagtgccatct
ccatccttgatagctacattagctcgtggaggaaactatcctgctgttgctgtaccattg
gttgctttagggactcaaagtggaaccattgatgtcattgacatttctgccaattctgtg
tcatcttccttttctgtacataatagtgttgttagaggtttacggtggctagggaattcc
agattggtgtcgttttcttacagtcaggtgaatgaaaaatctggaggttaccttaatcgt
cttgttgtgacctgtcttagaagtggctttaatagaaccttccgtgttatgcaaaagcct
gaacgtgctccantcagagctttaagagcttcttcatctggaaggtatcttcttatcctg
tttcgtgatgctcctgttgaagtttgggcaatgacaaagactcctatcatgcttagatca
ttagctcttccatttaccgttctggaatggacacttccaacagttccacggcctgctaaa
gagcgtacaaccatgacatcggataccgtatcttcaccaactaaggcatcattatctgat
actagtaagcttgcacaagaaggaaatcaggaggagacttctgaaagttttgcatttgca
ctggtaaatggtgcgcttggagtgnttgaagttcatggtcgaagaattcgggatttcaca
cccaaatggccttcatcttcttttgtttcatctgatggattaattacagccatggcctac
cgcttgccacacgtggtcatgggtgatagatcaggcnaaattcgttggtgggatgtaaca
accgggcattcttcatcttttaacactcacagagagggaatcnagcgaatcaaattttcc
cctgtagttcctggagaccacagtagaggacgtatagctgttctattttatgataataca
ttttccatatttgatcttgattcacaggatcccttggctaattccattttacaacatcaa
tttccagggacccttgtattggaacttgattggttgcctttacgaacagatagaaaagat
cctctagtattatgtattgcaggagctgatagtagctttcgccttgttgagatcataatt
aatgaaaagaagcatggctatggacgcaagacggccaaggaaagatttcggccaatgcct
atatgttcgcctttgttacttcctactccacatgcattggcattacggatgatcttgcag
ttaggtgtaaagccctcctggttaaagaagaagcctcaactcgtatctggagtttcagga
ggtggccatgaccttcggagtcacatgattgacttaccacctgttggtgactcggtggtg
ccagaaatgcttctcaaggtgcttgaaccttatcgtatagaaggttgcatacttgatgat
gcgagggcaaaattatattccaagttagtacataaaggcnntcctttgaggtttgccttt
gctgctgcaatttttggtgaatcctctgaagccctcttttggctacagttgcctagtgct
ctcagtcatctcatgaataagttagcaaataagtctcccagagaggtcaatcctcaatgt
ctaatggatcttgatgaagcttcgatgctgaataggataacctcaaagggaaaatcaatg
ccaagaactgggaagaaagaaacactcggtcaaggccaactantggcaatggctttcaaa
caagaggagttgtgggaaagtgcaaatgaacgcattccttggcatgaaagattggacggg
gaagaggttattcaaacgttacttcatgggcgtgaaacttacttgactgcacaattggta
aatgtaggattctgggtttgtgtgtatctcttgggaggaagtattgagggtgtattaggg
atcaatagcattgtgcatttcaacgtctcccttggagttgtgattattgtaagcaaacat
ggtccccatccttttgagtggacaacattaggggttaatagcactttccgaaatccttgg
aaggatatttctttcgaactcccttctttttctcagttttcttgttgttttgtggggatg
gagtttggtgttagctttgttggtttgcgggtgcgtcagagcaatggtcaaggagttcct
cctccatgtgcctttaagagattagggggtttttttgtggcttgccacggacgaattcaa
tctgttacccttgtttatctaactatcttcgtcgttaggcttgtatctgttggaaactta
gaagccgctgttagcttactgctttccacttctccagagagttcttacttctatgcaaat
gctctacgtgctgttgcactttcttcagcagtgtcaagatcacttctagaactggctgtc
aaggttgttgcagccaacatggtgagaactgatcggtcgttgtctggaactcatcttctc
tgcgctgtaggaagatatcaagaagcttgttctcagcttcaagatgctggatgctggacg
gatgctgcaactttagctgccacacatttaaaaggatctgattatgctagggtgctgcta
aggtgggccaatcatgtattccatagcgaacataacatctggagggcgctgatattgtac
gtcgcagctggtgcactacaagaggcactggcagcacttcgtgagtcgcaacaacccgac
actgcagctatgttcatcctggcatgtcgagaaatacatgcagaatttatctccaattta
gaaaattcagatgacgagtcagactcaaatgctttgaaaaacaaactccttaagttgccc
ggttggaccctgaaaatgatgacgttgtcgcagtcggtgaatattatggacaataccaga
gaaaacttgtgcacctctgcatggactccctgccgtattctgattgaagagtggaataac
ttctctccgtgtcgtgatgtgattaaccaattctccagggatttaccttttattgagttg
catccctga
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integrated database retrieval system
