Cucumis sativus (cucumber): 116406240 Help Entry 116406240         CDS       T02486                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism csv  Cucumis sativus (cucumber) Pathway csv04142   Lysosome biogenesis csv04148   Efferocytosis Brite KEGG Orthology (KO) [BR:csv00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     116406240    04148 Efferocytosis     116406240  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csv04131]     116406240 Membrane trafficking [BR:csv04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     116406240 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 zf-Vps39_C Clathrin CNH TPR_WDR35 zf-HC5HC2H AlaDh_PNT_N DUF2175 zf-HC5HC2H_2 Motif Other DBs NCBI-GeneID:  116406240 NCBI-ProteinID:  XP_031745812 LinkDB All DBs Position Unknown AA seq 778 aa AA seqDB search DNIGVFVDQNGKLLQEGRICWSEAPSVVVIQNPYAVALLPRYVEIRSLRSPYALIQTIVL RNGRHLIDSKHALVVGLDNSAYGLFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLR SAKESSIHIRYAHYLFDNGSYEEAMEHFLASQVDITYVLPIYPSIVLPKTTLVTETEKLV DLDDPHLSRASSGFSDDMESPLHQLESDENTSLESKKMNHNTLMALIKFLQKKRHNIIEK ATAEGTEEVVLDAVGDRFKKSYKGRGNIPISSGAREMAAILDTALLQALLFTGQSFAALE LLKGLNYCDVKICEEILQKNKHYSALLELYRCNSMHREALKLLHQLVEESKVNESQTELQ KFKPEMIIDYLKPLCGTDPMLVLEFSMTVLESCPTQTIDLFLSGNIPADLVNSYLKQHAP NLQATYLELMLAMNESSISGNLQNEMLQIYLSEVLEWYADLNAQNKWDEKIYSSTRKKLL SALESISGYQPEVLLKRLPSDALSEERAILLGKMNQHELALSLYVHKIHVPELALSYCDR VYESLANQQPTKSSGNIYLTLLQIYLNPRRTTKNFEKRITNLTSPQNMGTPKLGLGPSFK VKGGRAAKKIAAIEGAEDMKVSLSNTDSSRSDGDTDEPGEEGSSSIMLDEALNLLSQRWD RINGAQALKLLPKETKLQNLLQFIGPLLRKSSEAYRNSSVIKSLRQSENLQVRDELYSQR KPAIKITSDSMCSLCKKKIGTSVFAVYPNGKTLVHFVCFRDSQNMKAVSKDSPIRRRT NT seq 2337 nt NT seq  +upstreamnt  +downstreamnt gataacattggtgttttcgtggaccaaaatgggaaactgcttcaagaaggccggatttgt tggtcggaggctccttctgtcgttgtcatacaaaatccttatgcagttgctttgttgcca agatatgttgagattcggtctctccggtctccatatgcattgatacaaaccattgtcctt cgaaatggccggcatcttattgacagtaagcatgctctggttgttggattagacaattct gcttatggcctctttcctgttcctcttggtgcacagatagttcaattaacagcatctggt aactttgaggaagcgttggctctgtgcaagttgcttccacctgaagattcaagccttcga tctgcaaaggagagttcaatccatatcagatatgctcattatctttttgataatgggagc tatgaggaggcaatggaacattttttggcatctcaagtggatataacctacgtgcttccc atttatccttcaattgtccttccaaagacaactttggttactgaaacagagaaattggtg gatttggatgatcctcatctttcaagagcttcttcaggtttttcagatgacatggagtcg cctctacaccagctggaatctgatgagaacacatcactggagtcaaaaaaaatgaaccat aatactctcatggctctaatcaagtttttgcagaagaaaaggcacaacattattgaaaag gccactgctgaagggacagaagaggtagttttagatgctgttggagaccggtttaagaaa tcttacaagggacgaggaaatattcccatcagctctggtgctagggagatggcagctata ctggatacagcattacttcaagctctgctttttactggacaatcatttgcggctttggaa ttattgaaaggcctgaattattgtgacgtaaaaatatgtgaagagatccttcagaaaaat aaacattattcggctctgttagagttgtataggtgcaattctatgcatcgtgaagcttta aaacttttgcatcaattagtagaagagtcaaaagtcaacgagtctcaaactgaactccaa aagtttaaacctgaaatgatcattgactatcttaagcctctttgtggaactgatcccatg ctggttctggaattctcgatgaccgttcttgaaagctgccccacgcaaactattgatctc tttctttcggggaatattcctgcagacttggttaattcctatttgaagcaacatgctcca aacttgcaggcaacatatttggagcttatgcttgcaatgaacgagagttcaatttctgga aatctccaaaatgaaatgcttcaaatatatctttcggaagttcttgagtggtatgctgat ttaaatgctcaaaacaaatgggatgaaaaaatttactcctccacgagaaagaagttgttg tctgctttagagtcaatctcagggtatcagccggaagttctattaaaacgcctgccctcg gatgcattatctgaagaacgagcaattttattggggaagatgaaccagcatgagcttgcc ttatctctctatgttcataagatccatgttcctgagttggcactatcctactgtgaccgg gtttatgaatctttagctaaccagcaaccaacaaaatcttctggcaatatatacctgact cttttacaaatatacctcaatccccgcagaacaacaaaaaattttgagaagagaattact aacttaacatctcctcaaaatatggggactccaaaacttgggttaggtccgtcattcaag gttaaaggaggtcgtgcagctaagaaaattgctgcaatagaaggtgcagaagacatgaaa gttagtcttagtaacactgacagtagcaggagtgatggcgacactgatgaacctggcgaa gaaggaagctcttcaattatgcttgatgaagctctgaacctgttgagccaaaggtgggac agaattaatggagcacaggcactcaaacttttacccaaggaaacaaagttacagaacttg ctacaatttattggaccacttttaaggaaatccagtgaggcgtacaggaattcttcagtg ataaagagtttgcgacaaagtgaaaacttacaggtgagagacgaactctatagccaaagg aaacctgctataaaaataaccagtgatagcatgtgctctctctgtaagaagaaaataggg acgagcgttttcgcggtctatccgaatgggaaaacacttgtgcactttgtatgctttaga gactcacagaacatgaaggctgtgtctaaggattcacccataagaaggcgtacataa

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