Cucumis sativus (cucumber): 116406242
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Entry
116406242 CDS
T02486
Name
(RefSeq) uncharacterized protein LOC116406242
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
csv03015
mRNA surveillance pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116406242
09122 Translation
03013 Nucleocytoplasmic transport
116406242
03015 mRNA surveillance pathway
116406242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
116406242
03041 Spliceosome [BR:
csv03041
]
116406242
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116406242
Spliceosome [BR:
csv03041
]
Complex C
Other components
EJC/TREX
116406242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
116406242
NCBI-ProteinID:
XP_031745820
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MSSKSKYSILDNRPIDQWKVTELKEELKRRKLTIKGLKEDLVKRLDEAVRMEREENAEET
NGVDGDPPVTNSDNNQEHASIVSGTAKETNEDTNITDNVDDVGVQVEKDDSNAAVKEGGI
QDGAGLNGSPRVEEGSSVRVSTVETKTTVTETVVSEVAIGVGVEGLQNTESKDNEDRLEL
DSEDSKPQLDSEESKPHMVSEESKPQLVSEGSKPQLDSEDSKPLLDDVNMELQVENEYLK
SQQADLVHDSSAPDDQVSEVSPVLGSQVRTDSISTASVTINEMIELKENMSADHVKLELD
VKQEMVEPSSSIIVPDAGESHPMDVEEPHVNKNVQESLANRDVLESPENKDVMDSIVKED
VEKKEDVKDIISELHEKHDGVDVGFSEKLNLDRSSGDDSIEDTTENKTDSVNNLEEMGEK
NVKNEGLMSQEEKVVDIAMRGSTGDRKSIGIENDVTSLPAEKRRLHLLIQLKNSLLHWIS
FKFKINCLCFVLSDEVIFADQAVVGNESVKRQRRWNSENLKIPEPQNAAHTSTSNSKDIH
QSTAPKRNFSRSDSTASEDPSKERVVPPSPKPPTNSLRIDRFLRPFTLKAVQELLGKTGN
VTSFWMDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAP
QTPTPAVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTPTNNVAQA
REQLPLPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIK
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaaatcgaaatattcaattctcgacaatcgaccgattgatcagtggaaggtt
acggagttgaaagaggaacttaagagaaggaaattgaccatcaaggggttgaaggaagat
ttggttaaacggttagatgaagcagttcgaatggaaagggaagaaaatgctgaggaaacc
aatggtgttgatggtgaccctccagttacaaatagtgacaataaccaagagcatgcatct
attgtttctggaacggcgaaagaaactaatgaagatactaacatcacagataatgtagat
gatgttggagttcaggttgaaaaggatgatagtaatgcagctgtgaaggaaggtggaatt
caagatggggctggtcttaatggttcccccagggtagaagagggatcgtccgtccgtgtt
tctactgtggaaactaaaactactgtaactgaaaccgtagtatctgaagtagcaataggt
gtgggtgtggaaggtttgcagaacactgaaagcaaggataacgaggataggctcgagctg
gatagtgaggattcaaagccccagctggatagtgaggaatcaaagccccacatggttagt
gaggagtcaaagcctcaactggttagtgagggttcaaagccacagcttgatagtgaggat
tcaaagcccctgcttgatgatgtgaatatggagctccaggtggagaatgagtatttgaag
tctcaacaggcagatctcgtgcacgactcttctgctccagacgaccaggtatctgaggtc
agccctgttttagggtctcaagtaagaactgattctatttctactgcttctgtgacaatt
aatgaaatgattgaactaaaggaaaatatgtctgctgatcatgtaaaattagaactagat
gttaagcaggagatggtggaaccatcatccagcattattgtcccagatgctggcgaatca
catcctatggatgttgaagagccacatgtgaacaagaatgttcaagagtcacttgcaaac
agagatgttctggagtcacctgagaacaaagatgttatggactctattgtgaaagaagat
gttgagaagaaagaagatgttaaggacataatttctgagcttcatgagaagcatgatggt
gtagatgtggggttctctgaaaagcttaatttagatagaagttctggggatgattcaata
gaagatacaacagagaataagactgattcagtgaataatcttgaagaaatgggagagaag
aatgtaaaaaatgagggccttatgtcccaagaggaaaaggttgttgacatagcaatgcga
ggctcaactggagacagaaagagtattggtatagagaatgacgttacatctttgcctgct
gaaaaaagaaggcttcatttattgattcaattgaagaacagtttactgcattggatttcc
ttcaaatttaaaatcaattgtctttgttttgttttgtctgatgaggttatttttgcagat
caagcagtggttggaaatgagtccgtgaagagacagcgtaggtggaattctgagaacctc
aaaattccagagccccaaaatgctgctcatacatcgactagtaattcaaaggacattcat
caatccactgctccaaaacgcaacttctccagatctgactccacagctagtgaagatcca
tcaaaggaacgtgttgttccaccatcaccaaaacctcccacaaactcactaagaattgat
cgttttctgcgtccatttaccctcaaagctgtgcaagaacttctgggtaagactggcaat
gttaccagtttctggatggatcacatcaagacgcattgctatgtaacttactcgtcggtg
gaagaagccctgaagactagagatgctgtttacaaccttcaatggccaccaaatggtggg
cgtcttcttatagctgagtttgttgatcctcaagaagtaaaaactcgagtagaagctcca
cagactcctacacctgcggtggttgctccaccagtctctaacgtgcccccacccgtgcaa
cccgagccttcgcctcgtcaaccaaggcagcaacatgctccgccgccttctcttccacca
cccccgcccacacccacacccacacccacacccacacccacaaacaacgttgctcaagca
agggagcagctaccactcccacctccacctgcacttcccgataaagtcgacactcctatt
gtcaccttagacgaccttttcaggaaaaccaaggctactcctcgcatttactatttacct
ttatcagacgaacaggtgcagataaaacatacagcatcagcaaggggaaaagacattaag
cagtaa
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