Cucumis sativus (cucumber): 116406311
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Entry
116406311 CDS
T02486
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116406311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
116406311
03036 Chromosome and associated proteins [BR:
csv03036
]
116406311
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116406311
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116406311
PBAF complex
116406311
GBAF(ncBAF) complex
116406311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
RecO_C
Motif
Other DBs
NCBI-GeneID:
116406311
NCBI-ProteinID:
XP_031745865
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MERTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPP
IMEGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF
VVAKYMENPEKRVTVSDCQGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSY
LREDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRER
LAENHCSSCSRSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSVDFLRVDMAKDYGELD
SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV
SLSSSASHGGDSEKSRSNMNGNIAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP
RVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAREGSSYGELPNSTDRK
DENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL
KLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPASLPGVIPSMVVNN
SNTNSRPNMISPPASQPSVSGYSNNQQPLHPHMSYMPRQPMFGLGQRLPLSAIQQQQQQQ
QLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGLG
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagaggacaaatcagtatggcgagagtaaaggggtgcctggaaattccttgattttg
gagaatgtgtcttacgggcagcttcaggcactgtctgctatgccggcggatagtccggct
ttgctggatcaggagagggtggaggctgggaatgctgcctatgtaataactccgccaccg
atcatggaagggcgtggcgtggttaagaggtttgggagtagggtacatgttgtccctatg
cactcagattggttttcacctgccacggtgcatcgacttgagagacaagttgttccacat
tttttctctgggaaattgcctgaccgcactcctgaaaagtatatggagattcgaaatttt
gttgttgccaaatacatggagaatcctgagaaaagggtcacagtttcagattgtcaaggg
ttggttgatggtgtcagtaatgaagatttaactcgaattgttcgatttcttgatcattgg
ggtattattaattattgtgctcctacacctagctgtgaaccatggaatagcaattcatac
ttgagagaagatatgaacggtgagattcatgtgccatcagctgctttgaagcctattgat
agcttggttaaatttgacaaaccaaaatgtaggctcaaggcggctgatgtctattcggca
cttccatgccgtgatgacattgatggtttgtgtgatttggataacagaattcgagagcgt
ctagctgaaaatcattgtagctcttgttctcggtctgttcccattgcatactaccagtca
cagaaggaggttgatgttttactttgctctgactgctttcatgaaggcaaatacgttgct
ggccattcaagcgttgattttctgagggtggacatggcgaaagattatggtgaactagat
agtgaaaattggactgatcaagaaactctattgcttttagaagcaatagaattgtataat
gagaattggaatgaaattaccgaacacgttgggtccaagtctaaagctcagtgcattata
cattttctccgcttatcagtggaggatggccttctagaaaatgttgatgtgcctggggtt
tctctctcatcaagtgcttcacatggaggagatagtgagaagtcacgctcaaatatgaac
ggaaacatagcaggatcttcctctcaagataataaggagatgcacgataggcttcccttt
gccaattctgggaatccagtcatggcgttggttgcttttctcgcatctgctattggacca
agagttgctgcatcttgtgctcatgcatccttagctgcattatctgaggacagtgtagct
tcgtctgggagcatttttcatatggagggttctgtcaacgctaataggatgaatgtggat
gccaaacaagccagagaaggtagctcctatggagaacttccaaattcaaccgatcgaaaa
gatgagaacaaggcagagacagaagcaacactattatcatctgaaagagttaaagttgca
gcaaaagcaggccttgctgctgctgcaacaaaggcaaaattgtttgctgaccacgaagaa
cgagaaatccaacgactgtctgctaatattataaatcatcagttaaagagactggagctg
aagctgaagcagtttgcagaagtagaaaccttcttgatgaaggaatgcgaacaagttgag
aggacaaggcagaggtttgttgcagagcgagcaagaatgttaggtgtccaatttggacct
gctggagttacgccacctgcgagtttaccaggggttatcccttccatggtagtaaacaac
agcaacacaaacagtaggccgaatatgatctcacctccagcttcacagccgagtgtttca
gggtacagcaacaaccaacaaccacttcacccccacatgtcatatatgcctcgacagccg
atgtttggtttgggacaaagactacccttatcggcaattcagcagcagcagcaacaacaa
caactgccctcgacaacttcttctaatgccatgttcaatggtccaagcaatgcacagcct
tctctcagtcatccaatgatgaggcctgttactggatccagctctggcctaggctga
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integrated database retrieval system
