Cucumis sativus (cucumber): 116406344
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Entry
116406344 CDS
T02486
Name
(RefSeq) multisubstrate pseudouridine synthase 7-like
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csv03016
]
116406344
Enzymes [BR:
csv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
116406344
Transfer RNA biogenesis [BR:
csv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116406344
Prokaryotic type
116406344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
116406344
NCBI-ProteinID:
XP_031745921
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
LLEPYHCKFILFWFRYRYSDFIVNEVDTDGNVVHLTSLDAPPEIVSESGPTIVHSTSQSY
ASEIELFRSLAGDSDAEILEIFLKQINSGVNDDILPIVFSPDTDKTHRTAVHNFFKKFKF
LVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLR
FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDR
LIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVANSEDVIKASAEALGRHGFINYFGLQ
RFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGETNEIAKARDYYKESDDIDGTLKQLP
RYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKV
VVGDLVYCKENHTETAAVQNSEEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLVKAVT
AGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFSITSM
TGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKNEDSL
DSTDQSVCCKKNIQLEAGGKENENGQGTQDPQMALKLSFTLPASSYATMAIRELLKTSTS
VAFHKTLN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
cttttagaaccctatcattgtaaattcatccttttttggtttcgatacaggtattctgat
ttcattgtgaatgaagttgacactgatggaaatgttgttcatttgacgtcattggatgct
cctccagagattgtttcggaaagcggaccaacgatagtccacagtacaagccagagttat
gcttctgaaattgaattgtttagatctctagctggtgattctgatgctgagattttggaa
atttttcttaagcaaatcaattctggcgtgaatgatgacattttgcctattgtattctcc
cctgatacagacaaaactcatcgaacggctgtccacaatttctttaagaaatttaagttc
cttgtgaccgatactattgatgggccagattcttcatcaaaatgtgtccgtgtgagggtg
gattcaggggcacagaataaccgaggtcgtttctctaagaaacggaaagaaaggggcgat
aaaccctttgatagtagaggttcggacaactggcctgaacatgttggcaagtttctcagg
tttcatctttacaaggagaacaaggacacacaagaggcattaggacttataggaaagatg
cttggcatccagacgaggtcttttggttttgctggcactaaggataaacgctccatctca
actcaaagggtcactgtatttaagcaacacgcaagtagaatagctgctctgaatgatcgg
ttgattggtatcaagttgggtaactttagctatatccaggaagggcttcttcttgggcag
ctcctgggtaacaggtttaccatcaccttgcgaggtgttgtagctaatagtgaagacgtg
atcaaagcatctgcagaagctttaggaaggcatgggtttattaattactttggcttacag
cgttttggcagtggttctgtaccgactcatcttgttggagcttcacttcttagaggagag
tggaagggtgctgtcaatatgattcttgatccaagagaaggggaaaccaatgaaattgca
aaggcaagagactactacaaggaaagtgatgatattgatggaacgttgaagcaattacct
cgatatttagtggctgaaagagcaatactacaatgtttgaagaaatgtcctgggaactat
ttgcaggctcttaaagctatacctagaactttgagaatgatgtacgtgcatagttaccaa
agctatttatggaatcatgcagcaagtatgagagtgcaaaaatacgggattgacaaagtg
gttgttggagacttggtatactgtaaagaaaaccacactgaaacagctgcagtgcaaaat
tctgaagaatatgaagacgaggactgtggcgatgctaattcatacgactcttgtcattta
gaagaagtgtgcaagcttggtcttccaactgaaagacataagctagtgaaggctgttact
gctggagatgtcctcagtggaaactttactattgatgatgttgttcttcctttgcctgga
tcaagagtactctatcccacaaatgatattgctgaagtgtataacgatttagcgactaag
gactcgatcagcttgacgaattctgtacataatgtaaaggaattttcgattaccagtatg
actgggagctatcggagagtttttcaaagaccaaaggactacgagtgggaattgatctca
tatgttgatcgtaatttacctctggcacagagtgatttacataaccttttgaagtctcaa
agtgttgaaattagtaaggaagaaaagatagccgataaatctaaaaatgaagattcattg
gattccactgatcaatcagtgtgctgtaaaaagaatattcaacttgaagcagggggaaag
gagaatgaaaatgggcaaggcactcaggatcctcagatggctctcaagctgagctttact
ctcccggcatcttcttatgctacgatggcaattagagaattgctgaaaacatcaacttct
gttgctttccacaaaactttaaactag
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