Cucumis sativus (cucumber): 3429301
Help
Entry
3429301 CDS
T02486
Symbol
rpoA, CsCp074
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
3429301 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
3429301 (rpoA)
03400 DNA repair and recombination proteins [BR:
csv03400
]
3429301 (rpoA)
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
3429301 (rpoA)
Transcription machinery [BR:
csv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
3429301 (rpoA)
DNA repair and recombination proteins [BR:
csv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
3429301 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
3429301
NCBI-ProteinID:
YP_247632
UniProt:
Q4VZK3
A0A1X9Q1P4
LinkDB
All DBs
Position
Pltd:complement(80189..81190)
Genome browser
AA seq
333 aa
AA seq
DB search
MVREKIRVSTRTLKWKCVESRADSKRLYYGRFILSPLMKGQGDTIGIAMRKALLGEIEGT
CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
IILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNFQDASYPMDAIFMPVR
NVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEKENFH
LKNNKKKVTLPLFTFHEKLAKLRKKKKEIALKYIFIDQSELPPRIYNCLKRCNIHTLFDL
LNNSPDELMKIKHFRIEDVKHILDILEMEKNFA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaaatcagagtatcgactcggacactaaagtggaagtgtgttgaatca
agagcagacagtaagcgtctttattatggacgctttattctgtctccacttatgaagggg
caaggggatactataggcattgcgatgcgaaaagctttgcttggagaaatagagggaaca
tgtatcacacgtgcaaaatctgaaaaaatcccacatgaatactctaccatagtcggtatt
caagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatggaactcgtgatgcgtctatttgtgtcaagggtcctggatgcgtaactgctcaagac
atcatcttaccaccttcggtggaaatcgttgataatacacagcatatagctaacctaatg
gaaccaattaatttgtgtattgaattaaagatcgagaggaatcgcggatatcatatacaa
acgccaaataattttcaagacgcaagttatcctatggatgctatattcatgcctgttcga
aatgttaatcatagtatacattcttatgtaaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggaccaatggaagtttaactcctaaagaagcacttcatgaagcctctcgg
aatttgattgatttatttattccttttttacatgcggaagaagaaaaagaaaacttccat
ttaaaaaataataaaaaaaaagttactttacccctttttacttttcatgagaaattggcg
aaactaaggaaaaagaaaaaagaaatagcattaaaatatatttttattgaccaatcagaa
ttgcctcctaggatctataattgcctcaaaaggtgcaatatacatacattatttgacctt
ttgaataatagtccagacgaacttatgaaaatcaaacattttcgcatagaagacgtaaaa
catatattagacattctcgaaatggaaaagaattttgcataa
DBGET
integrated database retrieval system