Cucumis sativus (cucumber): 3429302
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Entry
3429302 CDS
T02486
Symbol
rpoB, CsCp018
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
3429302 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
3429302 (rpoB)
03400 DNA repair and recombination proteins [BR:
csv03400
]
3429302 (rpoB)
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
3429302 (rpoB)
Transcription machinery [BR:
csv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
3429302 (rpoB)
DNA repair and recombination proteins [BR:
csv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
3429302 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-GeneID:
3429302
NCBI-ProteinID:
YP_247591
UniProt:
Q4VZP1
LinkDB
All DBs
Position
CP
Genome browser
AA seq
1071 aa
AA seq
DB search
MLGGGNERMSTIPAFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI
LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLQRDILAAADHLIGLKFGM
GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP
LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN
GYTRRIPLVMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLCNL
DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
GRGRVIDVRWIQKKGGSSYNPEIIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV
FSELYEASKQTAKSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIH
GRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEV
LGTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggggtggaaatgagagaatgtctacaatacctgcgtttaatcagatacaattt
gaagggttttgtaggttcattgatcatggcttaacagaagaactttctaagtttccaaaa
attgaagatacagatcaagaaattgaatttcaattatttgtggaaacatataaattggta
gaaccattgataaaagaacgagatgctgtatatgaatcactcacatattcttctgaatta
tacgtatccgcaggattaatttggaaaacccgtagggatatgcaagaacaaacaattttt
attggaaacattcctctaatgaattccctgggaacttctatagtaaatggactataccga
attgtgatcagtcaaatattgcaaagccccggtatctattaccggtcagaattggaccat
aacggaatttcggtctataccggcaccataatatctgattggggaggaagattagaatta
gagattgatcgaaaagcaaggatatgggctcgtgtgagtaggaaacagaaaatatctatt
ctagttctatcatcagctatgggttcgaatctaagagaaattctcgagaatgtttgctac
cctgaaatttttttgtctttcctgaatgataaggagaaaaaaaaaattggatcaaaagaa
aatgccattttggagttttatcaacaattttcttgtgtaggcggagatccggtattttct
gaatccttatgtaaggaattacaaaagaaattctttcaacaaagatgtgaattaggaagg
attggtcgacgaaatctgaaccagagacttaatcttgatatacctgagaacaatacattt
ttgttacagcgagatatattggcagctgcggatcatttgattggacttaaatttggaatg
ggtacacttgacgatatgaatcatttgaaaaataaacggattcgttctgtcgcggatctc
ttacaagatcaattcggattggctctagttcgtttagaaaatatggttagaggaactata
tgtggagcaattaggcataaattgataccgactcctcagaatttggtaacttcaactcca
ttaacaaccacatttgaatcttttttcggattacacccattatctcaagttttagatcga
actaatccattgacacaaatagttcatgggcgaaaattgagttatttgggcccaggagga
ttgacagggcgaactgctagttttcggatacgagatatccatcctagtcattatggacgc
atttgcccaattgacacgtctgaaggaattaatgttggacttattggatcattagcaatt
catgcaaggattggtcattggggatctctagaaactccattttatgaaatttcagagaga
tcaaaaaaagtgcggatgctttatttatcaccaagtcgagatgaatactatatggtagcg
acaggaaattctttggcactgaatccaggtattcaggaagaacagattgttccagctcga
taccgtcaagaattcttgactattgaatgggaacaagttcatcttcgaagtatttttccc
ttccaatatttttctattggagcttccctcattccttttatcgaacataatgatgcgaat
cgtgctttaatgagttctaatatgcaacgtcaagcagtcccgctttctcggtccgaaaag
tgcattgttggaactgggttggaacgccaagtggctcgagattcaggggttgccgctata
gccgaacacgggggaaagatcatttataccgatactgacaagatcattttttcgggcaat
ggatatactcgaagaattccattagttatgtatcaacgttctaacaaaaatacttgtatg
cagcaaaaatcccaggttcaccagggtaaatgcataaaaaaagggcaaattttagcggac
ggtgctgctacagttggtggcgaacttgctttgggaaaaaacgtattagtagcttatatg
ccatgggaaggttacaattttgaagatgcggtactaattagcgagcgtttgatatatgaa
gatatttatacttctttccacatacggaaatatgaaattcaaactcatgtgacaagccac
ggacctgaaagaatcactaacgaaataccacatctagaagcccgcttactctgtaattta
gacaaaaatggaattgttatgctgggatcgtgggtggagacgggcgatattttagtaggt
aaattaacgcctcagatggcgaaagaatcatcgtatgccccggaagatagattattacga
gccatacttggcattcaggtatccacttcaaaagaaacctgtctaaaactacctatcggc
ggtaggggtcgagttattgatgtgagatggatccagaaaaaagggggttcgagttataat
ccagaaattattcgtgtatatatttcacagaaacgtgaaatcaaagtaggcgataaggta
gcgggaagacatggaaataaaggtattgtttcaaaaattttgcccagagaagatatgcct
tatttgcaaaatggaagacctgttgatatggttttcaatccattaggagtcccctcacga
atgaatgtaggacagatatttgagtgctcactcgggttagcggggagtttgctagataga
cattatcgaatagtaccttttgatgagagatatgaacaagaggcttctagaaaactagtc
ttttctgaattatatgaagccagtaagcaaacagcgaagtccccatgggtatttgaaccc
gagtatccgggaaaaagcagaatatttgatggaagaacgggaaatccttttgaacaacct
gttataataggaaagccttatatcttgaaattaattcatcaagttgatgataaaatacac
ggacgttccagtggacattatgcacttgttacacaacaaccccttagaggaagggccaag
caaggtggacaacgggtgggagaaatggaggtttgggctctagaaggatttggggttgct
catattttacaagagatgcttacttataaatctgatcatattagagctcggcaagaagta
cttggtactacgatcattggaggaacaatacctaaacccgaggatactccagaatctttt
cgattgctcgttcgagaattacgatctttggctttggaactgaatcatttccttgtatct
gagaagaacttccagattaataggaaggaagcttaa
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integrated database retrieval system
