KEGG   Chlamydia trachomatis Sweden2: SW2_0911
Entry
SW2_0911          CDS       T01966                                 
Symbol
lcrD
Name
(GenBank) low calcium response protein D (predicted to be part of the TTSS apparatus)
  KO
K03230  type III secretion protein V
Organism
csw  Chlamydia trachomatis Sweden2
Pathway
csw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:csw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SW2_0911 (lcrD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:csw02044]
    SW2_0911 (lcrD)
Secretion system [BR:csw02044]
 Type III secretion system
  Type III secretion core apparatus
   SW2_0911 (lcrD)
SSDB
Motif
Pfam: FHIPEP NUP120_helical_2
Other DBs
NCBI-ProteinID: CBJ14606
LinkDB
Position
complement(103876..106002)
AA seq 708 aa
MNKLLNFVSRTFGGDAALNMINKSSDLILAMWMLGVVLMIILPLPPAMVDFMITINLAIS
VFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFVVG
GNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAMPGKQMAIDADLRAGMIDATQ
ARDKRSQIQKESELYGAMDGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAH
IYTLITIGDGLVSQIPSLLISLTAGIVTTRVSSDKDTNLGKEISSQLVKEPRALLLSAGA
TLGIGFFKGFPLWSFALMAVLFAVLGILLITKKNSPGKKGGASSTTTVGAADGAAASGEN
SDDYALTLPVILELGKDLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTD
SPSLEGNDYMILLNEVPYVRGKILPNHVLTNEVEENLSRYNLPFITYKNAAGLPSTWVST
DALTILEKAAIKYWSPLEVIILHLSYFFHRNSQEFLGIQEVRSMIEFMERSFPDLVKEVT
RLIPLQKLTEIFKRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFK
FSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTITPTPPGGQ
PPVLLTAIDVRRYVRKLIETEFPDIAVISYQEVLPEIRIQPLGRIQIF
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgaacaagctactcaactttgtcagtagaacattcgggggagatgcggccctgaatatg
ataaacaagtccagtgacctgatcctcgccatgtggatgttaggcgtggtcttgatgatc
attttgccattgcctccagctatggtggactttatgatcaccattaacttggcgatctct
gtgttcctgctgatggttgccttgtatattcccagcgcattacaactttctgttttcccc
tccttactcttaatcaccacaatgttccgattggggattaacatttcttcctcccgacaa
attctccttcatgcttatgctggtcacgtgatccaagccttcggagacttcgtcgttgga
ggaaactatgtcgttggatttattatcttcctaatcatcaccatcattcagtttatcgtg
gtaacaaaaggtgcggagagggtcgctgaggtagctgctcgattccgattagatgccatg
cctggtaaacagatggccatcgatgccgacctacgagcaggaatgattgatgcgacacaa
gctcgtgataagcgatctcagattcagaaagaaagtgaactttatggagctatggacgga
gccatgaagttcattaagggagacgtgatcgcagggattgttatctccttgattaacatc
gtaggaggattagtcatcggagtgaccatgaagggcatgacgatggctcaagccgcgcac
atctacacgttgattacgatcggtgacgggttagtttctcaaatcccctctctgttaatc
tctttaacagctggtatcgtaaccactcgagtatctagtgataaagacactaaccttggt
aaggaaatttctagccagttggttaaagaacctcgggcacttctcctatctgcaggcgca
accttaggaatcggattcttcaaaggtttccctttatggtcatttgctttaatggccgtt
ctctttgcagtattaggtattctgttaatcactaagaaaaactctccagggaaaaaaggc
ggagccagctctactactacagtaggtgccgctgatggagctgcggcttcaggagaaaat
tctgatgattatgctctgactcttcctgtaattcttgaacttggaaaagatctttctaaa
ctcatccaacaacgaaccaaatcggggcaaagttttgtggatgatatgattcctaaaatg
cgtcaggctctctatcaggatattggaattcgttatccaggaatccatgtacgtacagac
tccccttccttggaaggtaatgactatatgattctgctgaatgaggttccctacgttcgc
ggaaaaattctaccaaatcatgtgttaacaaatgaagtagaagaaaacttatctcggtat
aacttaccttttattacttacaaaaatgctgcaggattgccttccacttgggttagtaca
gatgctctcactatcttagagaaagctgcgattaaatactggtctcctttggaagtgatt
attcttcacttgtcctacttcttccatagaaattctcaagagttcttaggcattcaggaa
gtacgctctatgattgaatttatggaacgttccttccctgatcttgttaaagaggttacc
cgtcttattcctctacagaagcttacagaaatctttaagcgtttagttcaagaacaaata
tccattaaggatttacgaactattttggaatctttgagcgaatgggcacagacggaaaag
gatacagtattacttactgaatatgtgcgctcttccttgaaactctatatcagcttcaag
ttctctcaagggcaatccgctatttctgtatatctgctcgatcctgaaattgaagagatg
atccgcggagcaatcaaacaaacttctgcaggatcttatttggctttagatccagattct
gtaaacctcatcttaaaatctatgcggatgactattactcctacacctcctggaggacag
cctcctgtgctgttgacagcaattgatgtcagacgctatgtacggaaattgatagagaca
gaattccctgatatcgctgtgatttcttaccaagaagttttacctgaaattagaatccag
cctttgggaagaattcaaattttctaa

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