Chlamydia trachomatis Sweden2: SW2_8211
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Entry
SW2_8211 CDS
T01966
Symbol
cafE
Name
(GenBank) ribonuclease E
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
csw
Chlamydia trachomatis Sweden2
Brite
KEGG Orthology (KO) [BR:
csw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csw03019
]
SW2_8211 (cafE)
03009 Ribosome biogenesis [BR:
csw03009
]
SW2_8211 (cafE)
Messenger RNA biogenesis [BR:
csw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SW2_8211 (cafE)
Ribosome biogenesis [BR:
csw03009
]
Prokaryotic type
rRNA processing factors
SW2_8211 (cafE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CBJ15334
LinkDB
All DBs
Position
complement(947405..948943)
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AA seq
512 aa
AA seq
DB search
MENDILLNIESKEIRYAHLKNGQLFDLIIERKKIRQLKGNIYRGRVTNILRNIQSAFINI
DERENGFIHISDVLENSKKFEQMFDIDSDADHAEPQPEETSEAPIEELLKLDSPVLVQVV
KEPIGTKGARLTSNISIPGRYLVLLPNSPHRGVSRKIEDPLMRDQLKQLIRSFEMPQNMG
LICRTASISASTETLINEAQDLLNTWQSILEKFYSPDHPSLLYEETDILKKAVMTCVDKS
YKRLLIDDYATYQKCKRLLGKYSPDTTVKIEYYRDSVPMFERFNIEKEIDRATKRKIWLS
SGGYLFFDKTEAMHTIDVNSGRSTQLENGVEETLVQINLEAAEEIARQLRLRNIGGLVII
DFIDMKSRKNQRRVLERLKEHMKYDAARCTILSMSEFGLVEMTRQRNRESLMQTLFTTCP
YCNGNAIIKTSESILIEIERDLKKIIKHKEHTNLCLVVHPEIAYYMKQEQDDVELIRLAK
QLKAKLQINTSDSIHLNHYQFFSLITGEGIEL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgatatcttactaaatatagagtctaaagagattcgttacgcgcatttaaaa
aatggccaattgtttgatctgatcattgaaagaaaaaaaattcgccagttaaaagggaac
atatatagaggtcgcgtaactaacattttacgaaacattcaatccgctttcattaacata
gatgagcgggagaatggctttattcatatctcggacgtattagagaattctaaaaaattc
gaacagatgttcgatatagattctgatgcagatcacgcagaaccccagccagaagaaacc
tccgaagctcctatagaagagctactcaaacttgacagtcccgtacttgttcaggtagtg
aaggaacctatagggacgaaaggagctcgactcacttctaatatttcaatccctggacgc
tacttagtccttctaccgaattcccctcaccgaggtgtttctcgtaagattgaagaccct
ctgatgcgagatcaactcaaacagttaattcgctcttttgaaatgccccaaaatatgggt
cttatctgtcggactgcgagtatctccgcttcaacagagactctaattaacgaggctcag
gatctcttgaatacttggcaaagtatcctagagaaattttattctccagatcatccttct
cttctctacgaagagacagatattctgaaaaaagctgtgatgacttgtgtagataagagc
tacaagcgtttgttaatagacgattacgcgacctatcaaaaatgcaaacgcttattgggt
aaatattctccagacacgactgtaaagattgagtattatcgcgattcggttccaatgttc
gaacgctttaatattgagaaagaaatcgatcgcgctaccaagagaaaaatctggctatct
agcggaggatatctcttctttgacaaaacagaagctatgcacacgatcgatgtgaactct
ggacgtagcacacagctggaaaatggagtcgaagagactctagtgcaaattaacttagaa
gccgcagaagaaattgctagacaactgcgtctaagaaatattggcggacttgtgatcata
gattttatcgatatgaaatcacgcaagaatcagcgtcgtgttttggaaagattaaaagag
cacatgaaatatgatgctgcgcgctgtacaatcttgagcatgagtgaatttgggttagta
gaaatgactcgccagagaaatcgtgagtcactaatgcagaccctatttaccacctgtcca
tattgtaatgggaacgcgatcatcaaaacctctgaaagtatcctcatagaaattgagcgt
gacctgaagaaaattattaaacacaaagagcacacgaacttgtgtttggtcgttcatccg
gaaatcgcctactatatgaaacaagagcaggacgatgtcgaactcattcgcttggctaag
caattgaaagctaagctacaaatcaatacgtccgattctatccatcttaaccactaccaa
tttttctcattgattacaggagaaggaattgagttataa
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