| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
csx Corynebacterium singulare
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csx00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSING_02165 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csx03021]
CSING_02165 (rpoC)
03400 DNA repair and recombination proteins [BR:csx03400]
CSING_02165 (rpoC)
Enzymes [BR:csx01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSING_02165 (rpoC)
Transcription machinery [BR:csx03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSING_02165 (rpoC)
DNA repair and recombination proteins [BR:csx03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSING_02165 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
447246..451241
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| AA seq |
1331 aa
MFDVNLFDELRIGLATAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
SCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDVESEIAERAAKLEQD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLESEAEELKEIINNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKGEDEIGGA
GAYAPANENGPAQGVYSSYAEAIMARDRGVLGLQAPIKVRISHLRPPADIEAEQFPDGWQ
KGQAWMAETTLGRIMFNDLLPWNYPYLEGVMVRKGGSANKMLLGDVINDLAAKYPMITVA
QVLDKMKDAGFYWATRSGVTITMHDVLVLPNKTEVLESYEKEAERIERKYWEQGALTERE
RYDRLVELWKDATDTVGEAVENMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVRVPLGVETTPGNYDLHELWETSASGRVVAGDVKDENGEVLAEAGADLTEELS
RKIVAAGVLEIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVTTGDRLMRGAADPHDVLE
VLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDAGTTDLLPGNLIDL
SEAKQVNAAQVAEGGQPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
QLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLEEDYTF |
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| NT seq |
3996 nt +upstreamnt +downstreamnt
gtgtttgacgtaaatctcttcgacgagctccgtatcggtctggccaccgccgaggacatc
cgccgctggtctaagggcgaggttaagaagcctgagaccattaactaccgaaccctcaag
ccagagaaggacggcctcttctgcgagcgcatcttcggtccgacccgcgactgggagtgc
tcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgagcgctgcggcgtc
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacatcgagctggccgcgccg
gttacccacatctggtacttcaagggtgttccttcccgtctgggttacctgctggacctg
gctccgaaggatcttgagcgcatcatttacttcgctgccaacatcatcacctccgtggac
gaggaagctcgccacaatgatcagtccactcttgaggcagaaatgcttctggagaagaag
gacgtagaggatgacgtcgagtccgagatcgctgagcgcgctgccaagctcgagcaggat
ctggctgagctggaagccgccggcgctaaggccgacgcccgccgcaaggtccagaacgct
gccgacaaggagatgcagcacatccgcgagcgcggtgagcgcgaggtcgctcgcctcgac
gaaatctggaacaccttcatcaagcttgctccgaagcagatgatcatcgatgagaccatc
tacgaagagctcgttgaccgctacgaggattacttcaccggcggtatgggtgctgaggcc
atccagaccctcatccgcaacttcgacctcgagtctgaggccgaggagctcaaggaaatc
atcaacaacggcaagggtcagaagaagatgcgtgccctgaagcgcctcaaggtcgtcgcg
gccttcttgcgctcgggcaacgacccggccggcatggtgcttgacgctatcccggtgatc
ccaccggagctgcgcccgatggtgcagctggacggtggccgcttcgccacctccgacctc
aacgatctgtaccgccgtgtgattaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcg
ctcttcgacaacggccgtcgcggccgtccggtcaccggcccgggcaaccgcccgctgaag
tcgctgtctgacctgcttaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgtgtcgactactctggtcgttccgttattatcgttggtccgcagctcaagctgcacgag
tgtggtctgccgaagctcatggctctggagctgttcaagcccttcgtcatgaagcgtctg
gtggagaacgactacgcccagaacatcaagtccgccaagcgcatggtggagcgtcagcgc
cctgaggtgtgggacgttcttgaagaggccatttctgagcacccagtcatgctgaaccgt
gcgccgaccctgcaccgcctgggtattcaggccttcgagccgaagctcgttgagggtaag
gcaattcagctgcacccgctggcctgcgaggccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccactgtccgctgaggcacaggctgaggcccgcgttctcatgctg
gcgtccaacaacattctgtctcctgcatccggtaagccgcttgcgatgccgcgtctggat
atggtgaccggcctgtactacctcaccatggacaagggcgaggacgagatcggtggcgcg
ggagcttacgctcccgcaaacgagaacggaccggcacagggcgtgtactcctcctacgca
gaggccatcatggctcgtgaccgtggcgtactgggcctgcaggccccgatcaaggtccgc
atttctcacctgcgtccgccggcagacatcgaggcagagcagttccccgatggctggcag
aaggggcaggcctggatggcggagaccacccttggccgcatcatgttcaatgacttgcta
ccgtggaactacccgtaccttgagggcgtcatggtccgtaagggcggttccgccaacaag
atgctcctcggtgacgtcattaatgaccttgctgcgaagtacccgatgatcaccgttgcc
caggttctggacaagatgaaggacgctggcttctactgggctacacgttctggcgtgacc
atcaccatgcacgacgttctggtcctcccgaacaagaccgaggttctcgagtcctatgag
aaggaagcagagcgcatcgagcgcaagtactgggagcagggtgctctgaccgagcgcgag
cgctacgaccgcctggttgagctctggaaggacgctaccgacaccgtcggtgaggccgtc
gagaacatgtacccggatgacaacccgattccgatgatcgttaagtccggtgcagccggt
aacatgcgtcagatctggaccctggccggtatgaagggcatggttgtgaactccaagggt
gactacatcacccgtccgattaagacctccttccgtgaaggtctgtcggttctggagtac
ttcaacaactcccacggctcccgtaagggtctggccgataccgctctgcgtaccgccgac
tctggttacctcacccgtcgtctcgtcgacgtggcacaggacgtcatcgtccgcgaagag
gactgtggcacccgtcagggtgtgcgcgtcccgctcggtgtcgaaaccaccccgggcaat
tacgatctgcacgagctgtgggagacctccgcatccggccgcgttgtcgcaggcgacgtc
aaggatgagaacggcgaggtgctcgctgaagctggcgcagacctcactgaggagctcagc
cgcaagatcgtcgccgctggtgttctggagatcaaggttcgctctgtgctgacctgccag
accccggccggtgtgtgcgcgaagtgctacggcaagtccatggcttctggccagctcgtt
gatatcggcgaggctgtcggtattgtggccgcccagtccattggtgagccgggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattaccggtggtctgccg
cgtgttcaggagctcttcgaggcccgtaacccgaagaaccgcgccccgattgcatccgtc
gacggcaccgtgtccctgtccgatgagggcaacttctggactctgaccatcactccggat
gacggttccgacaacgtggtttatgagaagctctcgaagcgtcagggcctggctcaggtc
cgtcgtccgatggagtcgaacccggatgccatgatcgagcgttctttgcgcgatggtgac
cacgtaaccaccggtgaccgcctcatgcgcggtgccgctgatccgcacgatgtgcttgag
gttctcggccgccgtggtgtggagaagcacctcattgatgaggtccaggctgtctaccgt
gcacagggtgtggccatccacgacaagcacattgagatcatcatccgtcagatgctgcgt
cgcggtaccgtcatcgacgctggtaccaccgacctgctgccgggtaacctcattgacctt
tcggaggccaagcaggtcaacgccgctcaggttgctgagggtggtcagccggctcagctg
cgcagtgagatcatgggtatcaccaaggcctcgctggctacggagtcctggctgtctgcg
gcttccttccaggagaccacgcgcgtgcttaccgacgccgccatcaacaagcgctcggat
cagctcatcggtctgaaggagaatgtcatcatcggtaagctgattccggccggtaccggt
atttcccgctaccgcaacatcagcgttaagccgaccgaggctgcacgcaatgctgcgtac
tccattccgacctacggtgattccatctacggcgacgatggcttcggtgagttcaccggc
gcctccgtgccgctggaggaggattacaccttctaa |
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