Corynebacterium singulare: CSING_10370
Help
Entry
CSING_10370 CDS
T03630
Symbol
rne
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
csx
Corynebacterium singulare
Pathway
csx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSING_10370 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csx03019
]
CSING_10370 (rne)
03009 Ribosome biogenesis [BR:
csx03009
]
CSING_10370 (rne)
Enzymes [BR:
csx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CSING_10370 (rne)
Messenger RNA biogenesis [BR:
csx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CSING_10370 (rne)
Ribosome biogenesis [BR:
csx03009
]
Prokaryotic type
rRNA processing factors
CSING_10370 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AJI79586
UniProt:
A0A0B6F6G1
LinkDB
All DBs
Position
complement(2177809..2181114)
Genome browser
AA seq
1101 aa
AA seq
DB search
MASKKKEEVRSESTLAAAVAGIDRDALAPKTRLYALAKQLGVASKELVAQFADMGMKKSA
QSSATPEEIGQLIDALAPTTHSEAQAADEKIEDKANEEAAAAEASAEASAEEKSTKTAPK
KRAKRAAKRVAKADKTENAAKEAETAKPQKDKPQKDKPQKQEPAKEELFSQPEDSADNVA
EQPQQPEQPEQLSEDEEKLRERVRKNVDNEISQIVDKVDAEMLHEALAESGDDFDEDDLT
PLITPMPEEEPEVYEYAPVFMAPKAAPTPKRQKPEVLDSADGSDEDAASSPQQRGRRRGS
RGTSRGRGAEGRGAEIIDEPKAIKGSTRIEAQRRRRAELREKGRERQHIVSQAEFLARRE
SVERTMVVRDKQRTDGAGIITQVGVLEDDLLVEHFVTTESHPSQIGNIYLGRVQNVLPSM
EAAFVDIGQGRNGVLYAGDVDWRALGIGGRGRKIENALKSGDQILVQVAKDPIGHKGARL
TTQISLAGRFLVYVPGGRSAGISRKLPAPERKRLKGILERVIPGDGGAIIRTAAENVPEE
DIATDVNRLHSLWEDISARAAHEKATKGAKPVTMYEEPDLLIKVVRDLFNEDFSTLVVDG
KRSYNTVRAYVDSMAHDLADRVVRYDSREHDGEDAFSTYRIDEQLHKALSRKVWLPSGGT
LIIERTEAMTVIDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQMRLRDMGGMIVVDFID
MVLPENQDLVLRRLKEALGRDRTRHQVSEVTSLGLVQMTRKRVGTGLIETFSTECEACNG
RGIIIHEYPVDEEPEEENSKPQRRGRKERRAPHRDPKQHPAAVRMHRHDDDEVENTAVRG
TDDIESFEDARGSKDSALEELVANVVVVDSDDDAVDHVGGDEVEAGTPDSASIGYAVAES
MAPKKSKRSRKPRRATRTSRKSEEKSEAQSSQNSEGSQRVDEQKADHSASTQDTSHEEQP
QQRSRKTYEEAVEEFEKSPRRKRRTRGNSRSDVRPKREDFEQEPEATTKSEAQANNTAAV
KESEKTDSASARNTRGRGRRRAVRRTMSAQQPTIVAETPQSSTTQKREETPARKKEAGAK
GASASRRGGRGRRRVTRRSSR
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaagaaaaaagaagaagtacgcagtgaatcgactctggcagcagcggtagcg
gggattgaccgtgacgcacttgcgcccaaaacccgcctgtacgccttagctaagcaactg
ggcgtggcctccaaggagttggtggcgcagtttgcggatatgggtatgaagaagtcggcg
cagtcctcggcaacgccagaggagattgggcaacttatagacgctctcgcccccaccacc
cactccgaggctcaggccgctgacgagaagatcgaggacaaggccaacgaagaggccgca
gccgcagaggcctcagccgaggcatcggctgaggaaaagtcgactaagactgccccgaag
aagcgggccaagcgcgcggcgaagcgcgttgccaaggccgacaagacggagaatgcagcg
aaagaagctgagaccgcaaagccccagaaggataagcctcaaaaggataagccgcagaag
caggagcccgcgaaggaggagttgttcagccagccggaggactccgcggataacgttgcg
gaacagccacagcagcccgagcagcccgagcagctgagcgaggacgaggaaaagctgcgc
gaacgcgtgcgcaagaacgttgacaatgaaatctcccagatcgtggacaaggttgacgct
gagatgctgcacgaggcactcgccgaatccggcgatgatttcgacgaggatgacctcact
ccgctgattacgccgatgccggaggaggaaccggaggtctacgagtacgcaccagtcttc
atggcgccgaaggccgccccgacgccgaagcgtcagaagccagaggtactggatagcgcc
gatggttctgacgaagacgcagcatcgtcgccgcagcagcgcggtcgccgtcgcggcagc
cgcggcacctcacgtgggcgcggtgctgagggccgtggggccgagattatcgacgaaccc
aaggccatcaagggctcgacccgcatcgaagcgcagcgtcgccgccgcgcagagctgcgc
gagaagggtcgcgagcgccagcacatcgtgtcccaggcggagtttttggctcgccgggag
tcggtggagcgcacgatggtggtgcgcgataagcagcgcaccgacggtgccggaattatt
actcaggtcggtgtgctcgaggatgacctccttgtcgagcacttcgtcacgaccgagtcg
cacccatcccagattggcaacatctacctgggccgcgttcagaacgtcttgccctcgatg
gaggctgcctttgttgatatcggacaggggcgaaatggcgtgctgtatgcgggggacgtc
gactggcgcgcgctcggcattggtgggcgcgggcgcaagattgagaacgccctgaagtcg
ggggatcagattctggtccaggtggctaaggatccgatcggccacaaaggtgcgcgcctg
acaacccagatttccctggccggccgcttcctggtctatgtcccgggtgggcgcagcgcg
ggtatttcccgtaagcttccggcaccggagcgcaagcgcctcaagggcattctggagcgc
gtcattccgggcgatggcggcgccattatccgcaccgccgcggaaaacgtcccggaagag
gacattgctaccgacgtcaaccgcctgcactccctgtgggaggacattagtgctcgcgcc
gctcacgaaaaggccaccaagggtgctaagccggtgacgatgtatgaggagccggatctg
ctcatcaaagttgtgcgagaccttttcaatgaggacttcagcacgctcgttgttgatggc
aagcgctcctacaacacagtgcgcgcctacgtcgattccatggcgcatgacctggcggat
cgcgtggtgcgctacgactcccgcgagcacgatggagaggatgccttcagcacgtaccgt
atcgacgagcagctgcacaaggctctcagccgcaaggtgtggctgccgtctggcggcacg
ctcatcatcgagcgcactgaggccatgaccgtcatcgacgtcaacactggtaagttcacc
ggatccggcggcaaccttgaggagaccgttacccgcaacaacctcgaagcagccgaagag
atcgtgcgccagatgcgcctgcgcgatatgggcggcatgatcgttgtggacttcatcgat
atggtcttgccggaaaaccaggacctcgtcctgcgccgcctcaaggaagccctgggacgc
gaccgcacccgccaccaggtctccgaggtgacctcgctaggcctagtgcagatgacccgc
aagcgcgtgggcaccggcctcatcgaaactttctcaactgagtgtgaggcctgcaacggt
cgcggaatcatcatccatgagtacccagtggatgaggaaccggaggaggagaactccaag
ccgcagcgccgcggccgcaaggagcgccgtgcaccgcaccgcgatccgaagcagcacccg
gccgccgtgcggatgcatcgacatgatgatgacgaggtagaaaacactgccgttcgcggc
acagacgacatcgaatcattcgaggatgcgcgtggcagcaaggactcggcactcgaggag
cttgtggccaacgtggtcgtcgtcgactcagacgacgacgctgtcgaccacgtcggcggc
gacgaggtcgaagccggcacaccggacagcgcgtccattggctatgccgtggcggagagc
atggcgccgaagaagtcgaagcgatcccgcaagccgcgccgggcaacgcgcacgtcgcgt
aagtccgaggagaagtccgaggcgcaaagctctcagaactctgagggctctcagcgcgtg
gacgagcagaaggctgatcactccgcgtccacacaggacacgtcgcacgaagagcagcca
cagcagcgctcgcgcaagacctacgaggaagccgtcgaggaattcgaaaagtcgccacgt
cgcaagcgccgcacgcgtggtaactcgcgctcggacgtgcgcccgaagcgcgaggacttc
gagcaggagccagaggcaacgacgaagtcggaggcgcaggcaaacaacactgccgcggtc
aaggaatctgaaaagactgacagtgcatccgcgcgtaacacccgcggtcgcggtcgtcgc
cgcgcggtgcgccgcacgatgagcgcccagcagccgactatcgtggcggagactccacag
tcctcgacgacccagaagcgggaggagacccccgcacggaagaaggaggctggggccaag
ggggcgtcggcaagccgcaggggtgggcgtggtaggcgccgtgtcacccgccgcagctcg
cgctag
DBGET
integrated database retrieval system
