Corynebacterium singulare: CSING_12830
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Entry
CSING_12830 CDS
T03630
Symbol
nei1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csx
Corynebacterium singulare
Pathway
csx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSING_12830 (nei1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csx03400
]
CSING_12830 (nei1)
Enzymes [BR:
csx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CSING_12830 (nei1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CSING_12830 (nei1)
DNA repair and recombination proteins [BR:
csx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSING_12830 (nei1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
SHOCT
Motif
Other DBs
NCBI-ProteinID:
AJI80051
UniProt:
A0A0B6F7P9
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All DBs
Position
2733209..2734024
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AA seq
271 aa
AA seq
DB search
MPEGHVIHRLARTLNADFRSGPLAVSSPQGRFASEAVLVDGSSLTLAEAFGKHLFIHFDA
ADPRHVIYIHLGLIGSLRFEPSADVWGQIRLRLDNGSTAANLRGPQFCTLITEEEYQAKV
AKVGQDPLREDADSNALWARVHASRRSIGAQLMDQGLFAGVGNIYRAETLFRQELSPFIP
GNQLDRAEFDAIWSDLVELMDYGVEHGRIDTVRDAHTPEAMGREPRKDDHGGEVYVYRRA
GQPCHVCGTEIQEKVMQGRNLFWCPTCQPAR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggacatgtcattcaccgcctcgcccgcacgctcaacgccgacttccgcagc
ggccccctggccgtgagcagcccgcagggtaggttcgcctccgaagcagtgcttgtcgac
ggctcctcactcaccctcgccgaggcctttggcaaacacctctttatccacttcgacgcc
gcggatccgcgccacgtcatctacattcacttaggcctcattggctcgctgcgcttcgaa
ccctcggcggatgtgtggggccagattcggcttcgcctggataacgggagcaccgctgcc
aacctgcgcggcccgcagttctgcacgctcatcacggaagaggagtaccaggccaaggtg
gcgaaagtggggcaggatcctctgcgtgaggatgccgactcgaatgctctgtgggcccgt
gtgcatgcctcacgacgcagcatcggcgctcagcttatggaccaaggactgttcgccggt
gtgggaaatatctatcgcgccgaaaccctcttccgccaggagctctctccctttatcccc
ggcaaccagctggaccgcgcagagttcgacgccatctggtctgacctggtggaacttatg
gactacggcgtggagcacggccgcatcgacaccgtccgggatgcccacacgccagaggcc
atgggccgcgagccccgcaaggatgaccacggcggcgaggtctacgtctaccgccgcgcc
gggcagccctgccatgtgtgcggcacggagatacaggagaaggtcatgcagggccgcaac
ctcttctggtgccccacctgccaacccgcgcgctag
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