Cenarchaeum symbiosum: CENSYa_0006
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Entry
CENSYa_0006 CDS
T01380
Name
(GenBank) hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
csy
Cenarchaeum symbiosum
Pathway
csy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CENSYa_0006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csy03019
]
CENSYa_0006
Messenger RNA biogenesis [BR:
csy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CENSYa_0006
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_3
Lactamase_B
RMMBL
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ABK76657
UniProt:
A0RTJ7
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All DBs
Position
complement(3428..4918)
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AA seq
496 aa
AA seq
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MTQLEFYGGIKEIGGNKILVEDKGTRVFLDFGMQMGRANDYFAEFMKPRTLNGMGDLFEF
DLLPQLDGIYRKDYAKHMGLKHWDSETSVDAVLLSHAHVDHCAYIKYLRPEIPVYCTEAT
KMILQVFDDAGMGEEYITYKRNFGFHKKNGVGIKTIGKKRETKPRDIRLIKNLEKFKVGN
IEVEPIAIDHSLPGACGFLMHTSSGTLGYTADIRFHGRHPDDSQKFVDRCGSEKPDCLLC
EGTRIDVPKSDLTEIEIESKARTMMEDTKGLVVCSYPPRDLDRMLSFYNAAKAAGRVLAI
DTRQAYLLKLFDESEECRGLFPSPKDPSIRVYLSRKKWGLIDKDPDYWTKKLVREDYKAW
EHEFLSYDNAVDYRDISKKQNDYVFHCSDFKLQELIDVRPDEGSRYIRSSTEPFDEEMEL
DQVRVKRWLGKFGLIGSDNKWETLHVSGHGTHDQIKGVIDGSASKMLIPIHTNKEDHFDA
LHNNVRKVNLGDTLHL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacccagctagagttctacggcgggataaaggagataggcggaaacaagatcctcgta
gaagacaagggaacgcgggtctttctagactttggaatgcagatgggcagggcaaacgac
tactttgccgagttcatgaagccccgcactcttaacggaatgggcgacctcttcgagttt
gacctgctgccgcagctggatggaatatacagaaaagattatgcaaagcacatggggcta
aagcactgggacagcgagactagcgtagatgccgtcctgctcagccacgcacatgtggat
cactgcgcctatatcaaatatctcaggccggagatacccgtgtattgtacagaggccaca
aagatgatcctgcaggtattcgacgatgccgggatgggggaagagtatatcacgtacaag
aggaactttggctttcacaaaaaaaacggggtgggtataaagacaatcggcaagaaaagg
gagacaaaaccccgggacatacggctgatcaaaaaccttgaaaagttcaaggtagggaac
atagaggtagagccgatagctatcgaccattccctgcccggggcttgcggctttctgatg
catacatcctcggggactctaggctataccgcggacatacgctttcacggccgccatccc
gatgacagccagaaatttgtagacaggtgcggctcagaaaagcccgactgcctgctctgc
gagggcacaagaatagacgtaccaaagtccgaccttaccgagatagagattgaatccaag
gcacggacaatgatggaggatacaaagggccttgtagtgtgcagctaccccccgagagac
cttgaccgcatgctgtcgttttacaacgcggcaaaggcagcaggcagagtcctggcaata
gacacaaggcaggcatatctgctcaaactgttcgatgaatcagaagagtgcagggggctc
ttcccatccccgaaggatcccagcatacgggtgtacctgtcccgcaaaaagtgggggctt
atcgacaaggatccggactattggaccaaaaagctggtccgggaagactacaaggcatgg
gagcacgagtttctaagctatgataacgcagtcgattacagggacatatccaaaaaacag
aacgactatgtatttcactgctcggactttaagctgcaggagctcatagatgtacggccg
gacgagggttcccgctatatccggtcatcgacagagccgtttgacgaagagatggagctc
gaccaggtccgtgtcaagcggtggctgggaaaattcgggctgattggctcagataacaaa
tgggagactctacacgtatcagggcatggaacgcacgaccagataaaaggagtaatagac
gggtccgcctccaagatgctaatcccgatacacacgaacaaagaggaccactttgacgcc
ctccataacaacgtcagaaaggtcaacctgggcgatacactgcatctttga
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